Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 IGHV3-65-201ENST00000523210 341 ntBASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 TERC-201ENST00000602385 541 ntBASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 AC008667.4-201ENST00000607370 168 ntBASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 Z83851.2-201ENST00000609564 659 ntBASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 AC046158.3-201ENST00000624947 2558 ntBASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT6Q9ULM6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 AC116353.5-201ENST00000638148 1699 ntBASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 MIR574-201ENST00000385209 96 ntBASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 AP002414.1-201ENST00000391405 1147 ntBASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT6Q9ULM6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT6Q9ULM6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT6Q9ULM6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT6Q9ULM6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CNOT6Q9ULM6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.03■□□□□ 0.32
CNOT6Q9ULM6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms