Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 IGLL3P-201ENST00000412472 434 ntBASIC16.94■□□□□ 0.3
SPASTQ9UBP0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 AL513190.1-201ENST00000621254 727 ntBASIC16.94■□□□□ 0.3
SPASTQ9UBP0 LINC01451-201ENST00000623792 534 ntBASIC16.94■□□□□ 0.3
SPASTQ9UBP0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 AL590787.1-201ENST00000568856 1315 ntBASIC16.94■□□□□ 0.3
SPASTQ9UBP0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SPASTQ9UBP0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.93■□□□□ 0.3
SPASTQ9UBP0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 AP006288.1-201ENST00000446065 395 ntBASIC16.93■□□□□ 0.3
SPASTQ9UBP0 DNAJB3-202ENST00000449667 1266 ntBASIC16.93■□□□□ 0.3
SPASTQ9UBP0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 AC004877.2-201ENST00000623941 599 ntBASIC16.93■□□□□ 0.3
SPASTQ9UBP0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 AC010507.1-201ENST00000633895 436 ntBASIC16.93■□□□□ 0.3
SPASTQ9UBP0 AC007064.4-201ENST00000637740 555 ntBASIC16.93■□□□□ 0.3
SPASTQ9UBP0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 BCAR1-209ENST00000546196 1340 ntBASIC16.93■□□□□ 0.3
SPASTQ9UBP0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SPASTQ9UBP0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 AC133963.1-201ENST00000504166 1679 ntBASIC16.92■□□□□ 0.3
SPASTQ9UBP0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 MKNK2P1-201ENST00000437526 628 ntBASIC16.92■□□□□ 0.3
SPASTQ9UBP0 YBX1P5-201ENST00000509441 847 ntBASIC16.92■□□□□ 0.3
SPASTQ9UBP0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 AL139327.4-201ENST00000612362 153 ntBASIC16.92■□□□□ 0.3
SPASTQ9UBP0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms