Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE7Q9UBL6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE7Q9UBL6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE7Q9UBL6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.45■□□□□ 0.22
CPNE7Q9UBL6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE7Q9UBL6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.45■□□□□ 0.22
CPNE7Q9UBL6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE7Q9UBL6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CPNE7Q9UBL6 AC012569.1-201ENST00000591191 1524 ntBASIC16.45■□□□□ 0.22
CPNE7Q9UBL6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CPNE7Q9UBL6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 AL021920.2-201ENST00000624828 1351 ntBASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 AC002056.1-201ENST00000395613 760 ntBASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 AC140658.5-201ENST00000438532 169 ntBASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CPNE7Q9UBL6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 HMGA1P7-201ENST00000406908 502 ntBASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 DUX4L17-201ENST00000557360 1267 ntBASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE7Q9UBL6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 HCG4-201ENST00000418983 998 ntBASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 CNN2P11-201ENST00000429351 262 ntBASIC16.42■□□□□ 0.22
CPNE7Q9UBL6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms