Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 ELK2BP-201ENST00000415014 1224 ntBASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 AC136632.2-201ENST00000512891 861 ntBASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 AL049840.3-201ENST00000602669 611 ntBASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 PGM5P2-202ENST00000637225 1043 ntBASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 AC018695.7-201ENST00000624587 2492 ntBASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 AL356488.2-201ENST00000602755 427 ntBASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 MIR1199-201ENST00000621445 119 ntBASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 AL805961.1-202ENST00000641562 540 ntBASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPARGC1AQ9UBK2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 AP002414.1-201ENST00000391405 1147 ntBASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 AC116407.3-201ENST00000623905 1129 ntBASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.72■□□□□ 0.43
PPARGC1AQ9UBK2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 AP002414.3-201ENST00000589352 1468 ntBASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms