Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 DUX4L17-201ENST00000557360 1267 ntBASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 AC092119.3-201ENST00000612618 583 ntBASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 HLA-A-202ENST00000376806 1854 ntBASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRTM1Q9HBL6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 AL391256.1-201ENST00000443260 1855 ntBASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 DOC2GP-204ENST00000639052 2548 ntBASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 ATP5G2P1-201ENST00000433580 426 ntBASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 AL591684.3-201ENST00000605187 298 ntBASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 AL021920.2-201ENST00000624828 1351 ntBASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LRTM1Q9HBL6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 AP002414.1-201ENST00000391405 1147 ntBASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms