Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 GPHN-202ENST00000459628 1723 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 TSPY13P-201ENST00000338964 914 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 UROS-201ENST00000368774 744 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 Y_RNA.548-201ENST00000384656 105 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 RCN1P1-201ENST00000400413 996 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AC136624.1-201ENST00000400791 413 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 SPTLC1P3-201ENST00000403408 259 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AL022329.1-201ENST00000412773 488 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AL365366.1-201ENST00000414898 853 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 SUMO1P3-201ENST00000439961 304 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AL662791.1-201ENST00000441992 928 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AL162395.1-201ENST00000457882 422 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 BZW1P2-201ENST00000473537 826 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AC073648.3-201ENST00000504939 925 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 RNU6-123P-201ENST00000516163 102 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 OR7E19P-201ENST00000588789 934 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AC084373.1-201ENST00000603311 235 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AC012557.1-201ENST00000607115 611 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AC137630.3-201ENST00000607245 391 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 CA15P2-201ENST00000611168 834 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AL137246.2-201ENST00000613439 662 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AC021683.4-201ENST00000623348 1099 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AC005858.2-201ENST00000624721 426 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 SAMMSON-221ENST00000641715 1546 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 AC017104.4-201ENST00000636283 1592 ntBASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC10.72□□□□□ -0.69
KRTAP3-3Q9BYR6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-3Q9BYR6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-3Q9BYR6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-3Q9BYR6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-3Q9BYR6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-3Q9BYR6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-3Q9BYR6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-3Q9BYR6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-3Q9BYR6 SUCLG2P2-201ENST00000307241 1296 ntBASIC10.71□□□□□ -0.69
KRTAP3-3Q9BYR6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-3Q9BYR6 HIST1H2BC-201ENST00000314332 659 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-3Q9BYR6 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-3Q9BYR6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-3Q9BYR6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms