Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
USB1Q9BQ65 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.27■□□□□ 0.04
USB1Q9BQ65 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
USB1Q9BQ65 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.27■□□□□ 0.04
USB1Q9BQ65 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
USB1Q9BQ65 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
USB1Q9BQ65 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
USB1Q9BQ65 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.27■□□□□ 0.04
USB1Q9BQ65 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
USB1Q9BQ65 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.27■□□□□ 0.04
USB1Q9BQ65 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.27■□□□□ 0.04
USB1Q9BQ65 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
USB1Q9BQ65 AC136632.2-201ENST00000512891 861 ntBASIC15.27■□□□□ 0.04
USB1Q9BQ65 IGHV3-22-201ENST00000520721 359 ntBASIC15.27■□□□□ 0.04
USB1Q9BQ65 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.27■□□□□ 0.04
USB1Q9BQ65 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.27■□□□□ 0.04
USB1Q9BQ65 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.27■□□□□ 0.04
USB1Q9BQ65 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
USB1Q9BQ65 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.27■□□□□ 0.04
USB1Q9BQ65 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.27■□□□□ 0.04
USB1Q9BQ65 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.27■□□□□ 0.04
USB1Q9BQ65 AF228730.7-201ENST00000641842 219 ntBASIC15.27■□□□□ 0.04
USB1Q9BQ65 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
USB1Q9BQ65 AC080080.1-201ENST00000625121 2420 ntBASIC15.27■□□□□ 0.03
USB1Q9BQ65 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
USB1Q9BQ65 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
USB1Q9BQ65 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
USB1Q9BQ65 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
USB1Q9BQ65 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
USB1Q9BQ65 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
USB1Q9BQ65 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
USB1Q9BQ65 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
USB1Q9BQ65 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
USB1Q9BQ65 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
USB1Q9BQ65 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 AC243591.1-201ENST00000452967 1364 ntBASIC15.26■□□□□ 0.03
USB1Q9BQ65 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.26■□□□□ 0.03
USB1Q9BQ65 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.26■□□□□ 0.03
USB1Q9BQ65 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
USB1Q9BQ65 KRT18P27-201ENST00000427733 1299 ntBASIC15.26■□□□□ 0.03
USB1Q9BQ65 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.26■□□□□ 0.03
USB1Q9BQ65 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.26■□□□□ 0.03
USB1Q9BQ65 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.26■□□□□ 0.03
USB1Q9BQ65 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.26■□□□□ 0.03
USB1Q9BQ65 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.26■□□□□ 0.03
USB1Q9BQ65 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 AC004706.3-202ENST00000621574 984 ntBASIC15.26■□□□□ 0.03
USB1Q9BQ65 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.26■□□□□ 0.03
USB1Q9BQ65 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
USB1Q9BQ65 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
USB1Q9BQ65 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.26■□□□□ 0.03
USB1Q9BQ65 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
USB1Q9BQ65 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.26■□□□□ 0.03
USB1Q9BQ65 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USB1Q9BQ65 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
USB1Q9BQ65 AC100803.2-201ENST00000562459 1963 ntBASIC15.25■□□□□ 0.03
USB1Q9BQ65 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.25■□□□□ 0.03
USB1Q9BQ65 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 AL356488.2-201ENST00000602755 427 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms