Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 AC093004.1-201ENST00000508850 424 ntBASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 AC092552.1-201ENST00000547243 906 ntBASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 SPTSSB-204ENST00000617024 1292 ntBASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 REXO1L6P-201ENST00000603433 1515 ntBASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM43Q96BQ3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 MIR4525-201ENST00000580000 75 ntBASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM43Q96BQ3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 SLC7A15P-201ENST00000424028 1363 ntBASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms