Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HPS3Q969F9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HPS3Q969F9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HPS3Q969F9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HPS3Q969F9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HPS3Q969F9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.82■□□□□ 0.6
HPS3Q969F9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HPS3Q969F9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
HPS3Q969F9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
HPS3Q969F9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.82■□□□□ 0.6
HPS3Q969F9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.82■□□□□ 0.6
HPS3Q969F9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HPS3Q969F9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.82■□□□□ 0.6
HPS3Q969F9 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.82■□□□□ 0.6
HPS3Q969F9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HPS3Q969F9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.82■□□□□ 0.6
HPS3Q969F9 AC087163.2-201ENST00000457299 853 ntBASIC18.82■□□□□ 0.6
HPS3Q969F9 AC009078.2-202ENST00000463353 338 ntBASIC18.82■□□□□ 0.6
HPS3Q969F9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.82■□□□□ 0.6
HPS3Q969F9 SLC25A6P2-201ENST00000497974 877 ntBASIC18.82■□□□□ 0.6
HPS3Q969F9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.82■□□□□ 0.6
HPS3Q969F9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.82■□□□□ 0.6
HPS3Q969F9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.82■□□□□ 0.6
HPS3Q969F9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.82■□□□□ 0.6
HPS3Q969F9 AL121894.2-201ENST00000602977 491 ntBASIC18.82■□□□□ 0.6
HPS3Q969F9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.82■□□□□ 0.6
HPS3Q969F9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
HPS3Q969F9 FAM215A-202ENST00000632077 792 ntBASIC18.82■□□□□ 0.6
HPS3Q969F9 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HPS3Q969F9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HPS3Q969F9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.82■□□□□ 0.6
HPS3Q969F9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.82■□□□□ 0.6
HPS3Q969F9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HPS3Q969F9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.82■□□□□ 0.6
HPS3Q969F9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HPS3Q969F9 AL662844.4-201ENST00000606367 2838 ntBASIC18.82■□□□□ 0.6
HPS3Q969F9 AL118508.1-201ENST00000613502 2345 ntBASIC18.82■□□□□ 0.6
HPS3Q969F9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS3Q969F9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
HPS3Q969F9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS3Q969F9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS3Q969F9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HPS3Q969F9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS3Q969F9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
HPS3Q969F9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS3Q969F9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS3Q969F9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS3Q969F9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS3Q969F9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.81■□□□□ 0.6
HPS3Q969F9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HPS3Q969F9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.81■□□□□ 0.6
HPS3Q969F9 AF186996.4-201ENST00000467186 377 ntBASIC18.81■□□□□ 0.6
HPS3Q969F9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.81■□□□□ 0.6
HPS3Q969F9 RPS15P9-201ENST00000494093 319 ntBASIC18.81■□□□□ 0.6
HPS3Q969F9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HPS3Q969F9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.81■□□□□ 0.6
HPS3Q969F9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS3Q969F9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
HPS3Q969F9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.81■□□□□ 0.6
HPS3Q969F9 AC006557.2-201ENST00000592985 1240 ntBASIC18.81■□□□□ 0.6
HPS3Q969F9 MIR7706-201ENST00000613747 67 ntBASIC18.81■□□□□ 0.6
HPS3Q969F9 AC008735.5-201ENST00000623544 497 ntBASIC18.81■□□□□ 0.6
HPS3Q969F9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HPS3Q969F9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS3Q969F9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HPS3Q969F9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HPS3Q969F9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS3Q969F9 PCDHB19P-201ENST00000570871 2371 ntBASIC18.81■□□□□ 0.6
HPS3Q969F9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS3Q969F9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HPS3Q969F9 AC002310.6-201ENST00000624451 1377 ntBASIC18.81■□□□□ 0.6
HPS3Q969F9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS3Q969F9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HPS3Q969F9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS3Q969F9 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.8■□□□□ 0.6
HPS3Q969F9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HPS3Q969F9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS3Q969F9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS3Q969F9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS3Q969F9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HPS3Q969F9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS3Q969F9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HPS3Q969F9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HPS3Q969F9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.8■□□□□ 0.6
HPS3Q969F9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS3Q969F9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.8■□□□□ 0.6
HPS3Q969F9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HPS3Q969F9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.8■□□□□ 0.6
HPS3Q969F9 RNA5SP419-201ENST00000515908 135 ntBASIC18.8■□□□□ 0.6
HPS3Q969F9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.8■□□□□ 0.6
HPS3Q969F9 AL160237.2-201ENST00000556165 472 ntBASIC18.8■□□□□ 0.6
HPS3Q969F9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.8■□□□□ 0.6
HPS3Q969F9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS3Q969F9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.8■□□□□ 0.6
HPS3Q969F9 AL805961.1-202ENST00000641562 540 ntBASIC18.8■□□□□ 0.6
HPS3Q969F9 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS3Q969F9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS3Q969F9 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS3Q969F9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.8■□□□□ 0.6
HPS3Q969F9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms