Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP3S1Q92572 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP3S1Q92572 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.03■□□□□ -0
AP3S1Q92572 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.03■□□□□ -0
AP3S1Q92572 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.03■□□□□ -0
AP3S1Q92572 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.03■□□□□ -0
AP3S1Q92572 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP3S1Q92572 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP3S1Q92572 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP3S1Q92572 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP3S1Q92572 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.03■□□□□ -0
AP3S1Q92572 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
AP3S1Q92572 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
AP3S1Q92572 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP3S1Q92572 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.03■□□□□ -0
AP3S1Q92572 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
AP3S1Q92572 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
AP3S1Q92572 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.03■□□□□ -0
AP3S1Q92572 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
AP3S1Q92572 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.02■□□□□ -0
AP3S1Q92572 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
AP3S1Q92572 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
AP3S1Q92572 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP3S1Q92572 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP3S1Q92572 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP3S1Q92572 AC144831.1-201ENST00000573312 2656 ntBASIC15.02■□□□□ -0
AP3S1Q92572 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
AP3S1Q92572 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.02■□□□□ -0
AP3S1Q92572 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.02■□□□□ -0
AP3S1Q92572 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.02■□□□□ -0
AP3S1Q92572 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP3S1Q92572 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
AP3S1Q92572 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP3S1Q92572 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
AP3S1Q92572 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.02■□□□□ -0
AP3S1Q92572 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
AP3S1Q92572 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.02■□□□□ -0
AP3S1Q92572 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP3S1Q92572 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.02■□□□□ -0
AP3S1Q92572 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.02■□□□□ -0
AP3S1Q92572 AC116562.2-201ENST00000507042 360 ntBASIC15.02■□□□□ -0
AP3S1Q92572 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.02■□□□□ -0
AP3S1Q92572 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.02■□□□□ -0
AP3S1Q92572 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.02■□□□□ -0
AP3S1Q92572 IKBKGP1-201ENST00000612193 1073 ntBASIC15.02■□□□□ -0
AP3S1Q92572 AL023803.3-201ENST00000615559 522 ntBASIC15.02■□□□□ -0
AP3S1Q92572 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
AP3S1Q92572 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S1Q92572 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S1Q92572 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S1Q92572 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S1Q92572 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S1Q92572 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S1Q92572 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.02□□□□□ -0.01
AP3S1Q92572 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
AP3S1Q92572 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S1Q92572 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S1Q92572 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
AP3S1Q92572 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S1Q92572 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.02□□□□□ -0.01
AP3S1Q92572 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
AP3S1Q92572 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S1Q92572 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S1Q92572 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S1Q92572 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S1Q92572 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
AP3S1Q92572 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.02□□□□□ -0.01
AP3S1Q92572 KRT89P-201ENST00000620027 1478 ntBASIC15.01□□□□□ -0.01
AP3S1Q92572 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
AP3S1Q92572 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 AC022532.1-201ENST00000624563 1728 ntBASIC15.01□□□□□ -0.01
AP3S1Q92572 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.01□□□□□ -0.01
AP3S1Q92572 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.01□□□□□ -0.01
AP3S1Q92572 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 FAM197Y1-201ENST00000421178 764 ntBASIC15.01□□□□□ -0.01
AP3S1Q92572 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
AP3S1Q92572 IGHV3-52-201ENST00000519770 353 ntBASIC15.01□□□□□ -0.01
AP3S1Q92572 BX088651.1-201ENST00000540551 451 ntBASIC15.01□□□□□ -0.01
AP3S1Q92572 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.01□□□□□ -0.01
AP3S1Q92572 MIR3917-201ENST00000580971 93 ntBASIC15.01□□□□□ -0.01
AP3S1Q92572 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.01□□□□□ -0.01
AP3S1Q92572 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.01□□□□□ -0.01
AP3S1Q92572 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms