Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
RTF1Q92541 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTF1Q92541 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC22.09■■□□□ 1.13
RTF1Q92541 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTF1Q92541 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTF1Q92541 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
RTF1Q92541 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
RTF1Q92541 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC22.09■■□□□ 1.13
RTF1Q92541 AL355306.1-201ENST00000415580 579 ntBASIC22.09■■□□□ 1.13
RTF1Q92541 AL671277.1-201ENST00000429656 993 ntBASIC22.09■■□□□ 1.13
RTF1Q92541 FAM86C2P-203ENST00000528684 1004 ntBASIC22.09■■□□□ 1.13
RTF1Q92541 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC22.09■■□□□ 1.13
RTF1Q92541 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC22.09■■□□□ 1.13
RTF1Q92541 AC087641.1-201ENST00000557561 1021 ntBASIC22.09■■□□□ 1.13
RTF1Q92541 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
RTF1Q92541 MPDU1-223ENST00000582151 728 ntBASIC22.09■■□□□ 1.13
RTF1Q92541 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC22.09■■□□□ 1.13
RTF1Q92541 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC22.09■■□□□ 1.13
RTF1Q92541 AC004835.2-201ENST00000603762 682 ntBASIC22.09■■□□□ 1.13
RTF1Q92541 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTF1Q92541 AP001350.2-201ENST00000625104 1094 ntBASIC22.09■■□□□ 1.13
RTF1Q92541 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC22.09■■□□□ 1.13
RTF1Q92541 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTF1Q92541 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTF1Q92541 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
RTF1Q92541 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
RTF1Q92541 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC22.09■■□□□ 1.13
RTF1Q92541 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC22.09■■□□□ 1.13
RTF1Q92541 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTF1Q92541 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
RTF1Q92541 AC131009.4-201ENST00000624048 1740 ntBASIC22.09■■□□□ 1.13
RTF1Q92541 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
RTF1Q92541 AC141586.5-201ENST00000624546 2050 ntBASIC22.08■■□□□ 1.13
RTF1Q92541 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RTF1Q92541 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTF1Q92541 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTF1Q92541 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTF1Q92541 HARS-204ENST00000438307 1789 ntTSL 2 BASIC22.08■■□□□ 1.13
RTF1Q92541 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC22.08■■□□□ 1.13
RTF1Q92541 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTF1Q92541 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTF1Q92541 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTF1Q92541 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTF1Q92541 METTL21AP1-201ENST00000438852 635 ntBASIC22.08■■□□□ 1.13
RTF1Q92541 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTF1Q92541 AC124947.2-201ENST00000547118 1133 ntBASIC22.08■■□□□ 1.13
RTF1Q92541 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC22.08■■□□□ 1.13
RTF1Q92541 METTL23-205ENST00000588302 925 ntTSL 5 BASIC22.08■■□□□ 1.13
RTF1Q92541 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC22.08■■□□□ 1.13
RTF1Q92541 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
RTF1Q92541 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC22.08■■□□□ 1.13
RTF1Q92541 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
RTF1Q92541 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RTF1Q92541 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
RTF1Q92541 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC22.08■■□□□ 1.12
RTF1Q92541 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC22.08■■□□□ 1.12
RTF1Q92541 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC22.08■■□□□ 1.12
RTF1Q92541 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC22.08■■□□□ 1.12
RTF1Q92541 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
RTF1Q92541 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC22.07■■□□□ 1.12
RTF1Q92541 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC22.07■■□□□ 1.12
RTF1Q92541 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
RTF1Q92541 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
RTF1Q92541 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
RTF1Q92541 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC22.07■■□□□ 1.12
RTF1Q92541 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC22.07■■□□□ 1.12
RTF1Q92541 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC22.07■■□□□ 1.12
RTF1Q92541 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
RTF1Q92541 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC22.07■■□□□ 1.12
RTF1Q92541 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
RTF1Q92541 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
RTF1Q92541 AC004461.1-201ENST00000412461 403 ntBASIC22.07■■□□□ 1.12
RTF1Q92541 ADH5P3-201ENST00000433842 1137 ntBASIC22.07■■□□□ 1.12
RTF1Q92541 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC22.07■■□□□ 1.12
RTF1Q92541 GATB-205ENST00000508611 605 ntTSL 2 BASIC22.07■■□□□ 1.12
RTF1Q92541 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC22.07■■□□□ 1.12
RTF1Q92541 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
RTF1Q92541 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 AL009183.1-201ENST00000603760 355 ntBASIC22.07■■□□□ 1.12
RTF1Q92541 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 AC026120.1-201ENST00000611536 926 ntBASIC22.07■■□□□ 1.12
RTF1Q92541 AL161645.1-201ENST00000622716 1255 ntBASIC22.07■■□□□ 1.12
RTF1Q92541 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 AC092053.1-201ENST00000605787 1936 ntBASIC22.07■■□□□ 1.12
RTF1Q92541 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTF1Q92541 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms