Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS1Q8NFJ9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS1Q8NFJ9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.34■□□□□ 0.05
BBS1Q8NFJ9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS1Q8NFJ9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BBS1Q8NFJ9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS1Q8NFJ9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.34■□□□□ 0.05
BBS1Q8NFJ9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.34■□□□□ 0.05
BBS1Q8NFJ9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
BBS1Q8NFJ9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS1Q8NFJ9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS1Q8NFJ9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS1Q8NFJ9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BBS1Q8NFJ9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
BBS1Q8NFJ9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
BBS1Q8NFJ9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
BBS1Q8NFJ9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
BBS1Q8NFJ9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BBS1Q8NFJ9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
BBS1Q8NFJ9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
BBS1Q8NFJ9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.33■□□□□ 0.05
BBS1Q8NFJ9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 AC090616.6-201ENST00000582640 721 ntBASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 AC073592.5-201ENST00000624854 528 ntBASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS1Q8NFJ9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 PAUPAR-201ENST00000630360 2965 ntBASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 AC022616.7-201ENST00000525383 220 ntBASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 AP005901.3-202ENST00000581653 237 ntBASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 AD001527.2-201ENST00000622994 785 ntBASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS1Q8NFJ9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms