Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15□□□□□ -0.01
ZIC4Q8N9L1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 AC078925.2-201ENST00000624013 1973 ntBASIC15□□□□□ -0.01
ZIC4Q8N9L1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 LINC00895-201ENST00000629028 1637 ntBASIC15□□□□□ -0.01
ZIC4Q8N9L1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15□□□□□ -0.01
ZIC4Q8N9L1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC4Q8N9L1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC4Q8N9L1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC4Q8N9L1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC4Q8N9L1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC4Q8N9L1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 RHOQP3-201ENST00000437982 621 ntBASIC15□□□□□ -0.01
ZIC4Q8N9L1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC4Q8N9L1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 AC091167.2-201ENST00000579581 588 ntBASIC15□□□□□ -0.01
ZIC4Q8N9L1 AC005412.3-201ENST00000580309 715 ntBASIC15□□□□□ -0.01
ZIC4Q8N9L1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC4Q8N9L1 AC013467.2-201ENST00000605472 835 ntBASIC15□□□□□ -0.01
ZIC4Q8N9L1 AC064836.3-201ENST00000607928 673 ntBASIC15□□□□□ -0.01
ZIC4Q8N9L1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC4Q8N9L1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC4Q8N9L1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC4Q8N9L1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15□□□□□ -0.01
ZIC4Q8N9L1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15□□□□□ -0.01
ZIC4Q8N9L1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 AC006277.1-201ENST00000624348 1610 ntBASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 MIR574-201ENST00000385209 96 ntBASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 AC096734.2-201ENST00000562054 433 ntBASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 AC140113.2-201ENST00000604370 208 ntBASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 AC027601.4-201ENST00000611259 610 ntBASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 AC010507.1-201ENST00000633895 436 ntBASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 AL353732.1-201ENST00000569618 1459 ntBASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 AGGF1P2-201ENST00000426656 2106 ntBASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 AL391256.1-201ENST00000443260 1855 ntBASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC4Q8N9L1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms