Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC155Q8N6L0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC155Q8N6L0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC155Q8N6L0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC155Q8N6L0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 AP002414.1-201ENST00000391405 1147 ntBASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 PDPK2P-202ENST00000562415 1191 ntBASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 AP002472.1-201ENST00000577490 586 ntBASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 STK25P1-201ENST00000585406 838 ntBASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC155Q8N6L0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.27■□□□□ 0.67
CCDC155Q8N6L0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 AC096734.2-201ENST00000562054 433 ntBASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC155Q8N6L0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 AL645939.2-201ENST00000427340 991 ntBASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 ACTG1P14-201ENST00000446382 1122 ntBASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 AC099398.1-201ENST00000567919 2776 ntBASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC155Q8N6L0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms