Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ZNF440Q8IYI8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
ZNF440Q8IYI8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF440Q8IYI8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF440Q8IYI8 PCDHB17P-201ENST00000539533 2393 ntBASIC15.55■□□□□ 0.08
ZNF440Q8IYI8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF440Q8IYI8 AGGF1P2-201ENST00000426656 2106 ntBASIC15.55■□□□□ 0.08
ZNF440Q8IYI8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF440Q8IYI8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF440Q8IYI8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF440Q8IYI8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF440Q8IYI8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
ZNF440Q8IYI8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 AC012313.10-201ENST00000623509 926 ntBASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF440Q8IYI8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 AC078925.2-201ENST00000624013 1973 ntBASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 TOP3BP1-201ENST00000420768 1380 ntBASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF440Q8IYI8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF440Q8IYI8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
ZNF440Q8IYI8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
ZNF440Q8IYI8 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF440Q8IYI8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF440Q8IYI8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF440Q8IYI8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF440Q8IYI8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF440Q8IYI8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF440Q8IYI8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF440Q8IYI8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF440Q8IYI8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF440Q8IYI8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF440Q8IYI8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms