Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTTNQ86VV8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTTNQ86VV8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RTTNQ86VV8 AC004967.1-201ENST00000453589 447 ntBASIC15.06■□□□□ 0
RTTNQ86VV8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RTTNQ86VV8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.06■□□□□ 0
RTTNQ86VV8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.06■□□□□ 0
RTTNQ86VV8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.06■□□□□ 0
RTTNQ86VV8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.06■□□□□ 0
RTTNQ86VV8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RTTNQ86VV8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTTNQ86VV8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTTNQ86VV8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RTTNQ86VV8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTTNQ86VV8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.06■□□□□ 0
RTTNQ86VV8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTTNQ86VV8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTTNQ86VV8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.06■□□□□ 0
RTTNQ86VV8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTTNQ86VV8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RTTNQ86VV8 AC097637.2-201ENST00000624096 1997 ntBASIC15.06■□□□□ 0
RTTNQ86VV8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RTTNQ86VV8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.06■□□□□ 0
RTTNQ86VV8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTTNQ86VV8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.06■□□□□ 0
RTTNQ86VV8 AC106886.4-201ENST00000623557 2502 ntBASIC15.06■□□□□ 0
RTTNQ86VV8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
RTTNQ86VV8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
RTTNQ86VV8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RTTNQ86VV8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RTTNQ86VV8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.05■□□□□ 0
RTTNQ86VV8 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.05■□□□□ 0
RTTNQ86VV8 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.05■□□□□ 0
RTTNQ86VV8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.05■□□□□ 0
RTTNQ86VV8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.05■□□□□ 0
RTTNQ86VV8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.05■□□□□ 0
RTTNQ86VV8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.05■□□□□ 0
RTTNQ86VV8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
RTTNQ86VV8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.05■□□□□ 0
RTTNQ86VV8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.05■□□□□ 0
RTTNQ86VV8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.05■□□□□ 0
RTTNQ86VV8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.05■□□□□ 0
RTTNQ86VV8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
RTTNQ86VV8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.05■□□□□ -0
RTTNQ86VV8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTTNQ86VV8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTTNQ86VV8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTTNQ86VV8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.05■□□□□ -0
RTTNQ86VV8 NCF1C-201ENST00000438382 1427 ntBASIC15.05■□□□□ -0
RTTNQ86VV8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RTTNQ86VV8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTTNQ86VV8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.05■□□□□ -0
RTTNQ86VV8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.05■□□□□ -0
RTTNQ86VV8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.05■□□□□ -0
RTTNQ86VV8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.05■□□□□ -0
RTTNQ86VV8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.05■□□□□ -0
RTTNQ86VV8 NKILA-202ENST00000614771 2598 ntBASIC15.05■□□□□ -0
RTTNQ86VV8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.05■□□□□ -0
RTTNQ86VV8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTTNQ86VV8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTTNQ86VV8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RTTNQ86VV8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTTNQ86VV8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
RTTNQ86VV8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RTTNQ86VV8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.04■□□□□ -0
RTTNQ86VV8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RTTNQ86VV8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
RTTNQ86VV8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
RTTNQ86VV8 AC016396.2-201ENST00000562575 1417 ntBASIC15.04■□□□□ -0
RTTNQ86VV8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
RTTNQ86VV8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.04■□□□□ -0
RTTNQ86VV8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTTNQ86VV8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTTNQ86VV8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.04■□□□□ -0
RTTNQ86VV8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RTTNQ86VV8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RTTNQ86VV8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.04■□□□□ -0
RTTNQ86VV8 STK19B-204ENST00000512515 211 ntBASIC15.04■□□□□ -0
RTTNQ86VV8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.04■□□□□ -0
RTTNQ86VV8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.04■□□□□ -0
RTTNQ86VV8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.04■□□□□ -0
RTTNQ86VV8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RTTNQ86VV8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTTNQ86VV8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.04■□□□□ -0
RTTNQ86VV8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTTNQ86VV8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTTNQ86VV8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RTTNQ86VV8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTTNQ86VV8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RTTNQ86VV8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RTTNQ86VV8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RTTNQ86VV8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTTNQ86VV8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTTNQ86VV8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.04■□□□□ -0
RTTNQ86VV8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.04■□□□□ -0
RTTNQ86VV8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.04■□□□□ -0
RTTNQ86VV8 COX20P2-201ENST00000452636 358 ntBASIC15.04■□□□□ -0
RTTNQ86VV8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.04■□□□□ -0
RTTNQ86VV8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.04■□□□□ -0
RTTNQ86VV8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms