Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 NTF6B-201ENST00000591913 560 ntBASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 Z69720.1-201ENST00000601483 472 ntBASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 AC099398.1-201ENST00000567919 2776 ntBASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 AC003669.1-201ENST00000334569 611 ntBASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 AL031133.1-201ENST00000406807 723 ntBASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 KLF4P1-201ENST00000412782 1185 ntBASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 AL845331.1-201ENST00000424978 1190 ntBASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 MINOS1P3-201ENST00000457048 203 ntBASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 KRT18P21-201ENST00000515767 1272 ntBASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 KRT18P1-202ENST00000452408 1331 ntBASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 AC005332.1-201ENST00000577698 1310 ntBASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms