Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ZNF550Q7Z398 HLA-A-201ENST00000376802 1334 ntBASIC15.68■□□□□ 0.1
ZNF550Q7Z398 NCF1C-201ENST00000438382 1427 ntBASIC15.68■□□□□ 0.1
ZNF550Q7Z398 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 AL356309.3-201ENST00000624132 1934 ntBASIC15.68■□□□□ 0.1
ZNF550Q7Z398 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 BX005266.1-201ENST00000473402 457 ntBASIC15.68■□□□□ 0.1
ZNF550Q7Z398 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 AC120114.3-201ENST00000611923 658 ntBASIC15.68■□□□□ 0.1
ZNF550Q7Z398 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF550Q7Z398 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 NKAPP1-205ENST00000585790 367 ntBASIC15.67■□□□□ 0.1
ZNF550Q7Z398 MTDHP3-201ENST00000594186 672 ntBASIC15.67■□□□□ 0.1
ZNF550Q7Z398 AL353135.1-201ENST00000606729 504 ntBASIC15.67■□□□□ 0.1
ZNF550Q7Z398 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF550Q7Z398 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 AL021920.2-201ENST00000624828 1351 ntBASIC15.66■□□□□ 0.1
ZNF550Q7Z398 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms