Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD4Q5XG99 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.55■□□□□ 0.24
LYSMD4Q5XG99 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.55■□□□□ 0.24
LYSMD4Q5XG99 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.55■□□□□ 0.24
LYSMD4Q5XG99 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.55■□□□□ 0.24
LYSMD4Q5XG99 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD4Q5XG99 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.55■□□□□ 0.24
LYSMD4Q5XG99 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.55■□□□□ 0.24
LYSMD4Q5XG99 AL355312.1-201ENST00000407115 2176 ntBASIC16.55■□□□□ 0.24
LYSMD4Q5XG99 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LYSMD4Q5XG99 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD4Q5XG99 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD4Q5XG99 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD4Q5XG99 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.55■□□□□ 0.24
LYSMD4Q5XG99 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.55■□□□□ 0.24
LYSMD4Q5XG99 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 AC012317.2-201ENST00000623305 2251 ntBASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 SPTLC1P1-201ENST00000447199 261 ntBASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 CYP2A7P1-201ENST00000595391 815 ntBASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 AC104581.1-202ENST00000635932 2618 ntBASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 AC009113.1-201ENST00000570267 2443 ntBASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD4Q5XG99 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 AL021920.2-201ENST00000624828 1351 ntBASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 AC073389.1-201ENST00000595595 795 ntBASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.53■□□□□ 0.24
LYSMD4Q5XG99 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms