Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC58Q4VC31 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC58Q4VC31 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC58Q4VC31 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC58Q4VC31 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC58Q4VC31 EGFEM1P-202ENST00000431685 1563 ntBASIC15.28■□□□□ 0.04
CCDC58Q4VC31 AC010460.3-201ENST00000511359 1579 ntBASIC15.28■□□□□ 0.04
CCDC58Q4VC31 AC006449.5-201ENST00000610658 2098 ntBASIC15.28■□□□□ 0.04
CCDC58Q4VC31 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 CYP2T1P-202ENST00000641596 2535 ntBASIC15.27■□□□□ 0.04
CCDC58Q4VC31 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.27■□□□□ 0.04
CCDC58Q4VC31 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 GPR32P1-201ENST00000601788 811 ntBASIC15.27■□□□□ 0.04
CCDC58Q4VC31 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
CCDC58Q4VC31 AP006294.2-201ENST00000641667 209 ntBASIC15.27■□□□□ 0.04
CCDC58Q4VC31 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC58Q4VC31 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC58Q4VC31 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC58Q4VC31 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC58Q4VC31 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC58Q4VC31 AC092068.3-201ENST00000587894 2016 ntBASIC15.27■□□□□ 0.03
CCDC58Q4VC31 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.27■□□□□ 0.03
CCDC58Q4VC31 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.27■□□□□ 0.03
CCDC58Q4VC31 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC58Q4VC31 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC58Q4VC31 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC58Q4VC31 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC58Q4VC31 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC58Q4VC31 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC58Q4VC31 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC58Q4VC31 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 CICP13-201ENST00000422015 2789 ntBASIC15.26■□□□□ 0.03
CCDC58Q4VC31 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 ZNF444P1-201ENST00000559497 298 ntBASIC15.26■□□□□ 0.03
CCDC58Q4VC31 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 AC019129.2-201ENST00000609837 1235 ntBASIC15.26■□□□□ 0.03
CCDC58Q4VC31 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC58Q4VC31 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 LINC01568-207ENST00000641790 1380 ntBASIC15.25■□□□□ 0.03
CCDC58Q4VC31 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 MIR662-201ENST00000384847 95 ntBASIC15.25■□□□□ 0.03
CCDC58Q4VC31 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC58Q4VC31 STARP1-201ENST00000397973 869 ntBASIC15.25■□□□□ 0.03
CCDC58Q4VC31 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms