Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 AC107890.1-201ENST00000422478 521 ntBASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 RN7SL589P-201ENST00000481268 310 ntBASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 AC002558.1-201ENST00000488906 803 ntBASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CTC1Q2NKJ3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CTC1Q2NKJ3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CTC1Q2NKJ3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 KRT18P32-201ENST00000424695 1287 ntBASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.14■□□□□ 0.49
CTC1Q2NKJ3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 FLJ13224-201ENST00000313737 1514 ntBASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 AP005018.1-201ENST00000525475 301 ntBASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 AC140878.1-201ENST00000565277 250 ntBASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 AC116407.2-201ENST00000613639 860 ntBASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 AC129492.6-201ENST00000611383 1305 ntBASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 FO538757.1-201ENST00000623083 1397 ntBASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTC1Q2NKJ3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 MYCLP1-201ENST00000372451 1075 ntBASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms