Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SSBP1Q04837 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.42□□□□□ -0.1
SSBP1Q04837 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP1Q04837 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.41□□□□□ -0.1
SSBP1Q04837 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.41□□□□□ -0.1
SSBP1Q04837 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP1Q04837 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SSBP1Q04837 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.41□□□□□ -0.1
SSBP1Q04837 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.41□□□□□ -0.1
SSBP1Q04837 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
SSBP1Q04837 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP1Q04837 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP1Q04837 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP1Q04837 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 AL390955.1-201ENST00000428694 934 ntBASIC14.41□□□□□ -0.1
SSBP1Q04837 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SSBP1Q04837 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.41□□□□□ -0.1
SSBP1Q04837 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.41□□□□□ -0.1
SSBP1Q04837 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.41□□□□□ -0.1
SSBP1Q04837 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.41□□□□□ -0.1
SSBP1Q04837 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP1Q04837 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP1Q04837 AC092666.2-201ENST00000613287 246 ntBASIC14.41□□□□□ -0.1
SSBP1Q04837 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.41□□□□□ -0.1
SSBP1Q04837 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP1Q04837 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SSBP1Q04837 AC009336.1-201ENST00000608941 1553 ntBASIC14.41□□□□□ -0.1
SSBP1Q04837 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP1Q04837 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP1Q04837 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.41□□□□□ -0.1
SSBP1Q04837 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
SSBP1Q04837 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP1Q04837 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP1Q04837 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SSBP1Q04837 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.41□□□□□ -0.1
SSBP1Q04837 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SSBP1Q04837 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP1Q04837 TSPY26P-202ENST00000565928 3884 ntBASIC14.41□□□□□ -0.1
SSBP1Q04837 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP1Q04837 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP1Q04837 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SSBP1Q04837 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP1Q04837 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP1Q04837 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SSBP1Q04837 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 ID1-201ENST00000376105 1233 ntBASIC14.4□□□□□ -0.1
SSBP1Q04837 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 MIR1238-201ENST00000408483 83 ntBASIC14.4□□□□□ -0.1
SSBP1Q04837 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.4□□□□□ -0.1
SSBP1Q04837 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.4□□□□□ -0.1
SSBP1Q04837 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.4□□□□□ -0.1
SSBP1Q04837 RASA4DP-201ENST00000460726 1199 ntBASIC14.4□□□□□ -0.1
SSBP1Q04837 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SSBP1Q04837 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
SSBP1Q04837 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP1Q04837 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.4□□□□□ -0.1
SSBP1Q04837 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.4□□□□□ -0.1
SSBP1Q04837 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP1Q04837 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP1Q04837 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.4□□□□□ -0.1
SSBP1Q04837 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.4□□□□□ -0.1
SSBP1Q04837 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP1Q04837 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.4□□□□□ -0.1
SSBP1Q04837 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SSBP1Q04837 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP1Q04837 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms