Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RPS8P6-201ENST00000426177 609 ntBASIC16.67■□□□□ 0.26
CDK3Q00526 AP006288.1-201ENST00000446065 395 ntBASIC16.67■□□□□ 0.26
CDK3Q00526 CEND1P1-201ENST00000451006 455 ntBASIC16.67■□□□□ 0.26
CDK3Q00526 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CDK3Q00526 AC087641.1-201ENST00000557561 1021 ntBASIC16.67■□□□□ 0.26
CDK3Q00526 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK3Q00526 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CDK3Q00526 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK3Q00526 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK3Q00526 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK3Q00526 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK3Q00526 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK3Q00526 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK3Q00526 AC131009.4-201ENST00000624048 1740 ntBASIC16.67■□□□□ 0.26
CDK3Q00526 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK3Q00526 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK3Q00526 AC108860.2-201ENST00000562760 2183 ntBASIC16.67■□□□□ 0.26
CDK3Q00526 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK3Q00526 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK3Q00526 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CDK3Q00526 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK3Q00526 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK3Q00526 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDK3Q00526 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.66■□□□□ 0.26
CDK3Q00526 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CDK3Q00526 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK3Q00526 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CDK3Q00526 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK3Q00526 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK3Q00526 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK3Q00526 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK3Q00526 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDK3Q00526 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CDK3Q00526 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK3Q00526 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.66■□□□□ 0.26
CDK3Q00526 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDK3Q00526 AC002056.1-201ENST00000395613 760 ntBASIC16.66■□□□□ 0.26
CDK3Q00526 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK3Q00526 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK3Q00526 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK3Q00526 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK3Q00526 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.66■□□□□ 0.26
CDK3Q00526 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.66■□□□□ 0.26
CDK3Q00526 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK3Q00526 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CDK3Q00526 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK3Q00526 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK3Q00526 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.66■□□□□ 0.26
CDK3Q00526 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.66■□□□□ 0.26
CDK3Q00526 AC079781.4-201ENST00000641908 219 ntBASIC16.66■□□□□ 0.26
CDK3Q00526 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDK3Q00526 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK3Q00526 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK3Q00526 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.66■□□□□ 0.26
CDK3Q00526 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK3Q00526 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK3Q00526 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK3Q00526 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDK3Q00526 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDK3Q00526 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.65■□□□□ 0.26
CDK3Q00526 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDK3Q00526 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK3Q00526 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.65■□□□□ 0.26
CDK3Q00526 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CDK3Q00526 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CDK3Q00526 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.65■□□□□ 0.26
CDK3Q00526 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK3Q00526 DNAJB3-202ENST00000449667 1266 ntBASIC16.65■□□□□ 0.26
CDK3Q00526 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CDK3Q00526 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.65■□□□□ 0.26
CDK3Q00526 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.65■□□□□ 0.26
CDK3Q00526 AP001160.2-201ENST00000596071 487 ntBASIC16.65■□□□□ 0.26
CDK3Q00526 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.65■□□□□ 0.26
CDK3Q00526 AP001350.2-201ENST00000625104 1094 ntBASIC16.65■□□□□ 0.26
CDK3Q00526 AL121761.2-201ENST00000598007 1648 ntBASIC16.65■□□□□ 0.26
CDK3Q00526 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK3Q00526 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDK3Q00526 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK3Q00526 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK3Q00526 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms