Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.04■□□□□ -0
NKX6-1P78426 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.04■□□□□ -0
NKX6-1P78426 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NKX6-1P78426 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.04■□□□□ -0
NKX6-1P78426 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
NKX6-1P78426 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.04■□□□□ -0
NKX6-1P78426 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NKX6-1P78426 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.04■□□□□ -0
NKX6-1P78426 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NKX6-1P78426 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NKX6-1P78426 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
NKX6-1P78426 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NKX6-1P78426 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
NKX6-1P78426 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NKX6-1P78426 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.03■□□□□ -0
NKX6-1P78426 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.03■□□□□ -0
NKX6-1P78426 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NKX6-1P78426 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NKX6-1P78426 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NKX6-1P78426 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.03■□□□□ -0
NKX6-1P78426 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NKX6-1P78426 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
NKX6-1P78426 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX6-1P78426 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX6-1P78426 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NKX6-1P78426 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX6-1P78426 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX6-1P78426 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.03■□□□□ -0
NKX6-1P78426 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX6-1P78426 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NKX6-1P78426 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX6-1P78426 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX6-1P78426 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX6-1P78426 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.03■□□□□ -0
NKX6-1P78426 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.03■□□□□ -0
NKX6-1P78426 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.03■□□□□ -0
NKX6-1P78426 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX6-1P78426 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX6-1P78426 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX6-1P78426 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.03■□□□□ -0
NKX6-1P78426 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.03■□□□□ -0
NKX6-1P78426 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NKX6-1P78426 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.03■□□□□ -0
NKX6-1P78426 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.03■□□□□ -0
NKX6-1P78426 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.03■□□□□ -0
NKX6-1P78426 AC092364.2-202ENST00000597012 1073 ntBASIC15.03■□□□□ -0
NKX6-1P78426 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
NKX6-1P78426 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
NKX6-1P78426 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.03■□□□□ -0
NKX6-1P78426 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.03■□□□□ -0
NKX6-1P78426 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NKX6-1P78426 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.03■□□□□ -0
NKX6-1P78426 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.03■□□□□ -0
NKX6-1P78426 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.03■□□□□ -0
NKX6-1P78426 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
NKX6-1P78426 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
NKX6-1P78426 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.02■□□□□ -0
NKX6-1P78426 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.02■□□□□ -0
NKX6-1P78426 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NKX6-1P78426 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NKX6-1P78426 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.02■□□□□ -0
NKX6-1P78426 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
NKX6-1P78426 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
NKX6-1P78426 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.02■□□□□ -0
NKX6-1P78426 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.02■□□□□ -0
NKX6-1P78426 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NKX6-1P78426 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NKX6-1P78426 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.02■□□□□ -0
NKX6-1P78426 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.02■□□□□ -0
NKX6-1P78426 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NKX6-1P78426 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.02■□□□□ -0
NKX6-1P78426 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.02■□□□□ -0
NKX6-1P78426 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.02■□□□□ -0
NKX6-1P78426 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.02■□□□□ -0
NKX6-1P78426 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.02■□□□□ -0
NKX6-1P78426 AC254562.1-201ENST00000417586 456 ntBASIC15.02■□□□□ -0
NKX6-1P78426 HTR5BP-201ENST00000430851 1154 ntBASIC15.02■□□□□ -0
NKX6-1P78426 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NKX6-1P78426 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.02■□□□□ -0
NKX6-1P78426 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.02■□□□□ -0
NKX6-1P78426 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.02■□□□□ -0
NKX6-1P78426 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.02■□□□□ -0
NKX6-1P78426 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.02■□□□□ -0
NKX6-1P78426 MIR4469-201ENST00000583919 79 ntBASIC15.02■□□□□ -0
NKX6-1P78426 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.02■□□□□ -0
NKX6-1P78426 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX6-1P78426 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
NKX6-1P78426 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NKX6-1P78426 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NKX6-1P78426 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
NKX6-1P78426 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.02□□□□□ -0.01
NKX6-1P78426 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NKX6-1P78426 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX6-1P78426 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX6-1P78426 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NKX6-1P78426 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
NKX6-1P78426 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
NKX6-1P78426 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NKX6-1P78426 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
NKX6-1P78426 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms