Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
HIST1H2BDP58876 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 AL139327.4-201ENST00000612362 153 ntBASIC12.8□□□□□ -0.36
HIST1H2BDP58876 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 AC135279.3-201ENST00000610945 1311 ntBASIC12.8□□□□□ -0.36
HIST1H2BDP58876 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H2BDP58876 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.79□□□□□ -0.36
HIST1H2BDP58876 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 AP002490.2-201ENST00000524791 560 ntBASIC12.79□□□□□ -0.36
HIST1H2BDP58876 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 CR383656.2-201ENST00000548656 2254 ntBASIC12.79□□□□□ -0.36
HIST1H2BDP58876 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H2BDP58876 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H2BDP58876 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H2BDP58876 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H2BDP58876 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H2BDP58876 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H2BDP58876 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HIST1H2BDP58876 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H2BDP58876 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.78□□□□□ -0.36
HIST1H2BDP58876 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H2BDP58876 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms