Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.63■□□□□ 0.09
CDH11P55287 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH11P55287 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH11P55287 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH11P55287 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH11P55287 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH11P55287 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CDH11P55287 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH11P55287 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH11P55287 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CDH11P55287 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH11P55287 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CDH11P55287 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDH11P55287 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH11P55287 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 AC092068.3-201ENST00000587894 2016 ntBASIC15.62■□□□□ 0.09
CDH11P55287 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 IGHV3-47-201ENST00000425060 335 ntBASIC15.62■□□□□ 0.09
CDH11P55287 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.62■□□□□ 0.09
CDH11P55287 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
CDH11P55287 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH11P55287 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.62■□□□□ 0.09
CDH11P55287 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDH11P55287 AP005901.3-202ENST00000581653 237 ntBASIC15.62■□□□□ 0.09
CDH11P55287 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CDH11P55287 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH11P55287 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH11P55287 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
CDH11P55287 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH11P55287 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
CDH11P55287 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 AC092171.3-201ENST00000610122 2651 ntBASIC15.61■□□□□ 0.09
CDH11P55287 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH11P55287 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH11P55287 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CDH11P55287 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.61■□□□□ 0.09
CDH11P55287 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CDH11P55287 AC008741.2-201ENST00000612792 3115 ntBASIC15.61■□□□□ 0.09
CDH11P55287 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CDH11P55287 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH11P55287 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CDH11P55287 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.61■□□□□ 0.09
CDH11P55287 EMBP1-201ENST00000458200 901 ntBASIC15.61■□□□□ 0.09
CDH11P55287 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CDH11P55287 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.61■□□□□ 0.09
CDH11P55287 AC124947.2-201ENST00000547118 1133 ntBASIC15.61■□□□□ 0.09
CDH11P55287 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.61■□□□□ 0.09
CDH11P55287 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.61■□□□□ 0.09
CDH11P55287 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.61■□□□□ 0.09
CDH11P55287 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CDH11P55287 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH11P55287 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.61■□□□□ 0.09
CDH11P55287 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms