Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LBX1P52954 RN7SL769P-201ENST00000469386 295 ntBASIC18.9■□□□□ 0.62
LBX1P52954 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.9■□□□□ 0.62
LBX1P52954 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.9■□□□□ 0.62
LBX1P52954 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.9■□□□□ 0.62
LBX1P52954 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.9■□□□□ 0.62
LBX1P52954 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.9■□□□□ 0.62
LBX1P52954 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LBX1P52954 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.9■□□□□ 0.62
LBX1P52954 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LBX1P52954 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LBX1P52954 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LBX1P52954 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LBX1P52954 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.9■□□□□ 0.62
LBX1P52954 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LBX1P52954 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LBX1P52954 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LBX1P52954 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LBX1P52954 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LBX1P52954 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LBX1P52954 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LBX1P52954 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
LBX1P52954 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.89■□□□□ 0.62
LBX1P52954 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LBX1P52954 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.89■□□□□ 0.61
LBX1P52954 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
LBX1P52954 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LBX1P52954 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LBX1P52954 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LBX1P52954 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LBX1P52954 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.89■□□□□ 0.61
LBX1P52954 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LBX1P52954 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
LBX1P52954 FNTAP2-201ENST00000430308 634 ntBASIC18.89■□□□□ 0.61
LBX1P52954 AL162726.2-201ENST00000438986 1017 ntBASIC18.89■□□□□ 0.61
LBX1P52954 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC18.89■□□□□ 0.61
LBX1P52954 AC098859.1-201ENST00000502915 1238 ntBASIC18.89■□□□□ 0.61
LBX1P52954 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.89■□□□□ 0.61
LBX1P52954 FAM86HP-204ENST00000513466 959 ntBASIC18.89■□□□□ 0.61
LBX1P52954 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC18.89■□□□□ 0.61
LBX1P52954 RARRES2P5-201ENST00000564013 466 ntBASIC18.89■□□□□ 0.61
LBX1P52954 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.89■□□□□ 0.61
LBX1P52954 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LBX1P52954 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.89■□□□□ 0.61
LBX1P52954 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LBX1P52954 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LBX1P52954 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LBX1P52954 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
LBX1P52954 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LBX1P52954 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LBX1P52954 KRT8P12-202ENST00000472924 1397 ntBASIC18.89■□□□□ 0.61
LBX1P52954 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LBX1P52954 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.89■□□□□ 0.61
LBX1P52954 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LBX1P52954 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.88■□□□□ 0.61
LBX1P52954 AL137060.1-201ENST00000618151 2648 ntBASIC18.88■□□□□ 0.61
LBX1P52954 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.88■□□□□ 0.61
LBX1P52954 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LBX1P52954 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.88■□□□□ 0.61
LBX1P52954 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LBX1P52954 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LBX1P52954 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LBX1P52954 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LBX1P52954 AC234644.1-201ENST00000406065 370 ntBASIC18.88■□□□□ 0.61
LBX1P52954 AC026954.1-201ENST00000429771 1293 ntBASIC18.88■□□□□ 0.61
LBX1P52954 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
LBX1P52954 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.88■□□□□ 0.61
LBX1P52954 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.88■□□□□ 0.61
LBX1P52954 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.88■□□□□ 0.61
LBX1P52954 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.88■□□□□ 0.61
LBX1P52954 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LBX1P52954 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LBX1P52954 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.88■□□□□ 0.61
LBX1P52954 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.88■□□□□ 0.61
LBX1P52954 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.88■□□□□ 0.61
LBX1P52954 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LBX1P52954 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.88■□□□□ 0.61
LBX1P52954 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
LBX1P52954 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LBX1P52954 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LBX1P52954 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LBX1P52954 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LBX1P52954 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LBX1P52954 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LBX1P52954 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LBX1P52954 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LBX1P52954 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.87■□□□□ 0.61
LBX1P52954 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LBX1P52954 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.87■□□□□ 0.61
LBX1P52954 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.87■□□□□ 0.61
LBX1P52954 AC079316.1-201ENST00000548397 411 ntBASIC18.87■□□□□ 0.61
LBX1P52954 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.87■□□□□ 0.61
LBX1P52954 AC092337.1-201ENST00000568699 1129 ntBASIC18.87■□□□□ 0.61
LBX1P52954 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.87■□□□□ 0.61
LBX1P52954 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.87■□□□□ 0.61
LBX1P52954 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.87■□□□□ 0.61
LBX1P52954 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LBX1P52954 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LBX1P52954 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LBX1P52954 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms