Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 HOXB1-202ENST00000577092 1414 ntBASIC19.87■□□□□ 0.77
MRE11P49959 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
MRE11P49959 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
MRE11P49959 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 AC004951.3-201ENST00000418645 1148 ntBASIC19.87■□□□□ 0.77
MRE11P49959 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.87■□□□□ 0.77
MRE11P49959 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
MRE11P49959 DGCR10-201ENST00000609839 495 ntBASIC19.87■□□□□ 0.77
MRE11P49959 AC092119.3-201ENST00000612618 583 ntBASIC19.87■□□□□ 0.77
MRE11P49959 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
MRE11P49959 AC141257.4-201ENST00000634557 245 ntBASIC19.87■□□□□ 0.77
MRE11P49959 AC136944.6-201ENST00000634818 245 ntBASIC19.87■□□□□ 0.77
MRE11P49959 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
MRE11P49959 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.87■□□□□ 0.77
MRE11P49959 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
MRE11P49959 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRE11P49959 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
MRE11P49959 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
MRE11P49959 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MRE11P49959 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MRE11P49959 C1R-202ENST00000536053 2347 ntTSL 2 BASIC19.86■□□□□ 0.77
MRE11P49959 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRE11P49959 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRE11P49959 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRE11P49959 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
MRE11P49959 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRE11P49959 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRE11P49959 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRE11P49959 AC093525.9-201ENST00000624961 1746 ntBASIC19.86■□□□□ 0.77
MRE11P49959 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.86■□□□□ 0.77
MRE11P49959 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MRE11P49959 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.86■□□□□ 0.77
MRE11P49959 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
MRE11P49959 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.86■□□□□ 0.77
MRE11P49959 AC097488.1-201ENST00000507834 756 ntBASIC19.86■□□□□ 0.77
MRE11P49959 AC079776.4-201ENST00000511039 504 ntBASIC19.86■□□□□ 0.77
MRE11P49959 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRE11P49959 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
MRE11P49959 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.86■□□□□ 0.77
MRE11P49959 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRE11P49959 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.86■□□□□ 0.77
MRE11P49959 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MRE11P49959 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.86■□□□□ 0.77
MRE11P49959 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRE11P49959 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRE11P49959 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.86■□□□□ 0.77
MRE11P49959 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
MRE11P49959 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
MRE11P49959 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRE11P49959 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
MRE11P49959 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
MRE11P49959 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.85■□□□□ 0.77
MRE11P49959 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.85■□□□□ 0.77
MRE11P49959 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.85■□□□□ 0.77
MRE11P49959 MIR3180-5-201ENST00000583743 153 ntBASIC19.85■□□□□ 0.77
MRE11P49959 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.85■□□□□ 0.77
MRE11P49959 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
MRE11P49959 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.85■□□□□ 0.77
MRE11P49959 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
MRE11P49959 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRE11P49959 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
MRE11P49959 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms