Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1A1P48729 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1A1P48729 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1A1P48729 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1A1P48729 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 ELK2BP-201ENST00000415014 1224 ntBASIC15.15■□□□□ 0.02
CSNK1A1P48729 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1A1P48729 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1A1P48729 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1A1P48729 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1A1P48729 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1A1P48729 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1A1P48729 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1A1P48729 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.15■□□□□ 0.02
CSNK1A1P48729 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1A1P48729 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1A1P48729 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1A1P48729 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1A1P48729 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.14■□□□□ 0.02
CSNK1A1P48729 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 AC005915.1-201ENST00000624912 2018 ntBASIC15.14■□□□□ 0.01
CSNK1A1P48729 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 AP002414.1-201ENST00000391405 1147 ntBASIC15.14■□□□□ 0.01
CSNK1A1P48729 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 KRT18P67-201ENST00000432816 1264 ntBASIC15.14■□□□□ 0.01
CSNK1A1P48729 AC079781.3-201ENST00000449110 356 ntBASIC15.14■□□□□ 0.01
CSNK1A1P48729 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CSNK1A1P48729 TUBB8P12-201ENST00000308911 1335 ntBASIC15.14■□□□□ 0.01
CSNK1A1P48729 TUBB7P-202ENST00000428444 1305 ntBASIC15.14■□□□□ 0.01
CSNK1A1P48729 TUBB8P7-204ENST00000567960 1332 ntBASIC15.14■□□□□ 0.01
CSNK1A1P48729 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1A1P48729 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
CSNK1A1P48729 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.13■□□□□ 0.01
CSNK1A1P48729 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.13■□□□□ 0.01
CSNK1A1P48729 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CSNK1A1P48729 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 RPS2P28-201ENST00000314255 741 ntBASIC15.13■□□□□ 0.01
CSNK1A1P48729 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CSNK1A1P48729 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.13■□□□□ 0.01
CSNK1A1P48729 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CSNK1A1P48729 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms