Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.01■□□□□ 0.47
BRCC3P46736 AL645939.2-201ENST00000427340 991 ntBASIC18.01■□□□□ 0.47
BRCC3P46736 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.01■□□□□ 0.47
BRCC3P46736 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.01■□□□□ 0.47
BRCC3P46736 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.01■□□□□ 0.47
BRCC3P46736 AC023141.5-201ENST00000458585 616 ntBASIC18.01■□□□□ 0.47
BRCC3P46736 CYMP-203ENST00000474680 1263 ntBASIC18.01■□□□□ 0.47
BRCC3P46736 AC109322.1-201ENST00000524499 1264 ntBASIC18.01■□□□□ 0.47
BRCC3P46736 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.01■□□□□ 0.47
BRCC3P46736 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.01■□□□□ 0.47
BRCC3P46736 AC087641.1-201ENST00000557561 1021 ntBASIC18.01■□□□□ 0.47
BRCC3P46736 RARRES2P8-201ENST00000566335 367 ntBASIC18.01■□□□□ 0.47
BRCC3P46736 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.01■□□□□ 0.47
BRCC3P46736 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
BRCC3P46736 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
BRCC3P46736 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
BRCC3P46736 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.01■□□□□ 0.47
BRCC3P46736 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
BRCC3P46736 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.01■□□□□ 0.47
BRCC3P46736 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
BRCC3P46736 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.01■□□□□ 0.47
BRCC3P46736 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRCC3P46736 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRCC3P46736 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BRCC3P46736 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18■□□□□ 0.47
BRCC3P46736 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18■□□□□ 0.47
BRCC3P46736 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRCC3P46736 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRCC3P46736 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
BRCC3P46736 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18■□□□□ 0.47
BRCC3P46736 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18■□□□□ 0.47
BRCC3P46736 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
BRCC3P46736 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18■□□□□ 0.47
BRCC3P46736 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRCC3P46736 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRCC3P46736 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRCC3P46736 RNU1-129P-201ENST00000384064 167 ntBASIC18■□□□□ 0.47
BRCC3P46736 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18■□□□□ 0.47
BRCC3P46736 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18■□□□□ 0.47
BRCC3P46736 MTRF1LP2-201ENST00000506027 1122 ntBASIC18■□□□□ 0.47
BRCC3P46736 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18■□□□□ 0.47
BRCC3P46736 FAM86C2P-203ENST00000528684 1004 ntBASIC18■□□□□ 0.47
BRCC3P46736 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18■□□□□ 0.47
BRCC3P46736 AC004449.1-201ENST00000564240 433 ntBASIC18■□□□□ 0.47
BRCC3P46736 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18■□□□□ 0.47
BRCC3P46736 U1.21-201ENST00000580816 167 ntBASIC18■□□□□ 0.47
BRCC3P46736 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRCC3P46736 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
BRCC3P46736 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRCC3P46736 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18■□□□□ 0.47
BRCC3P46736 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BRCC3P46736 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18■□□□□ 0.47
BRCC3P46736 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18■□□□□ 0.47
BRCC3P46736 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18■□□□□ 0.47
BRCC3P46736 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18■□□□□ 0.47
BRCC3P46736 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18■□□□□ 0.47
BRCC3P46736 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BRCC3P46736 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18■□□□□ 0.47
BRCC3P46736 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18■□□□□ 0.47
BRCC3P46736 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
BRCC3P46736 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18■□□□□ 0.47
BRCC3P46736 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18■□□□□ 0.47
BRCC3P46736 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
BRCC3P46736 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
BRCC3P46736 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
BRCC3P46736 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BRCC3P46736 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BRCC3P46736 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BRCC3P46736 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
BRCC3P46736 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.99■□□□□ 0.47
BRCC3P46736 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BRCC3P46736 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
BRCC3P46736 AC106820.2-201ENST00000563775 3264 ntBASIC17.99■□□□□ 0.47
BRCC3P46736 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
BRCC3P46736 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BRCC3P46736 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
BRCC3P46736 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
BRCC3P46736 AL627223.1-201ENST00000416693 442 ntBASIC17.99■□□□□ 0.47
BRCC3P46736 AC005237.2-201ENST00000434368 219 ntBASIC17.99■□□□□ 0.47
BRCC3P46736 AL592309.1-201ENST00000443127 649 ntBASIC17.99■□□□□ 0.47
BRCC3P46736 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.99■□□□□ 0.47
BRCC3P46736 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.99■□□□□ 0.47
BRCC3P46736 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.99■□□□□ 0.47
BRCC3P46736 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.99■□□□□ 0.47
BRCC3P46736 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BRCC3P46736 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.99■□□□□ 0.47
BRCC3P46736 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.99■□□□□ 0.47
BRCC3P46736 AL031055.1-201ENST00000606362 631 ntBASIC17.99■□□□□ 0.47
BRCC3P46736 AL161645.1-201ENST00000622716 1255 ntBASIC17.99■□□□□ 0.47
BRCC3P46736 AL021920.2-201ENST00000624828 1351 ntBASIC17.99■□□□□ 0.47
BRCC3P46736 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.99■□□□□ 0.47
BRCC3P46736 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms