Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RFC4P35249 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC4P35249 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC21.16■□□□□ 0.98
RFC4P35249 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC4P35249 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC4P35249 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.16■□□□□ 0.98
RFC4P35249 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFC4P35249 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC4P35249 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC4P35249 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFC4P35249 MTND6P24-201ENST00000440466 518 ntBASIC21.16■□□□□ 0.98
RFC4P35249 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RFC4P35249 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC21.16■□□□□ 0.98
RFC4P35249 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.16■□□□□ 0.98
RFC4P35249 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.16■□□□□ 0.98
RFC4P35249 IFT20-216ENST00000588477 774 ntTSL 5 BASIC21.16■□□□□ 0.98
RFC4P35249 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC4P35249 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC4P35249 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC4P35249 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.16■□□□□ 0.98
RFC4P35249 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.16■□□□□ 0.98
RFC4P35249 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
RFC4P35249 CETN4P-206ENST00000642099 2168 ntBASIC21.16■□□□□ 0.98
RFC4P35249 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFC4P35249 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.16■□□□□ 0.98
RFC4P35249 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
RFC4P35249 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RFC4P35249 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RFC4P35249 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC4P35249 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC21.15■□□□□ 0.98
RFC4P35249 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFC4P35249 AC087289.5-201ENST00000586076 3175 ntBASIC21.15■□□□□ 0.98
RFC4P35249 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RFC4P35249 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC4P35249 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC4P35249 AC098614.1-201ENST00000368528 745 ntBASIC21.15■□□□□ 0.98
RFC4P35249 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFC4P35249 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC21.15■□□□□ 0.98
RFC4P35249 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC4P35249 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFC4P35249 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.15■□□□□ 0.98
RFC4P35249 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC4P35249 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC21.15■□□□□ 0.98
RFC4P35249 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFC4P35249 AL589739.1-201ENST00000607720 493 ntBASIC21.15■□□□□ 0.98
RFC4P35249 AL844908.2-201ENST00000609461 460 ntBASIC21.15■□□□□ 0.98
RFC4P35249 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC21.15■□□□□ 0.98
RFC4P35249 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RFC4P35249 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC4P35249 ABALON-201ENST00000629058 1903 ntBASIC21.15■□□□□ 0.98
RFC4P35249 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC4P35249 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.15■□□□□ 0.98
RFC4P35249 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC4P35249 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC4P35249 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.15■□□□□ 0.98
RFC4P35249 LINC00895-201ENST00000629028 1637 ntBASIC21.15■□□□□ 0.98
RFC4P35249 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RFC4P35249 FOXO1B-201ENST00000504678 1527 ntBASIC21.14■□□□□ 0.98
RFC4P35249 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFC4P35249 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.14■□□□□ 0.98
RFC4P35249 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.98
RFC4P35249 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.14■□□□□ 0.98
RFC4P35249 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFC4P35249 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.14■□□□□ 0.97
RFC4P35249 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFC4P35249 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
RFC4P35249 RPL37AP1-201ENST00000412502 279 ntBASIC21.14■□□□□ 0.97
RFC4P35249 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC21.14■□□□□ 0.97
RFC4P35249 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC21.14■□□□□ 0.97
RFC4P35249 PRYP6-201ENST00000514804 343 ntBASIC21.14■□□□□ 0.97
RFC4P35249 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC21.14■□□□□ 0.97
RFC4P35249 HILS1-202ENST00000545329 423 ntBASIC21.14■□□□□ 0.97
RFC4P35249 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC21.14■□□□□ 0.97
RFC4P35249 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFC4P35249 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFC4P35249 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFC4P35249 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFC4P35249 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFC4P35249 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFC4P35249 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFC4P35249 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
RFC4P35249 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFC4P35249 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.14■□□□□ 0.97
RFC4P35249 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFC4P35249 AC009113.1-201ENST00000570267 2443 ntBASIC21.14■□□□□ 0.97
RFC4P35249 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFC4P35249 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RFC4P35249 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFC4P35249 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.14■□□□□ 0.97
RFC4P35249 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.13■□□□□ 0.97
RFC4P35249 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.13■□□□□ 0.97
RFC4P35249 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.13■□□□□ 0.97
RFC4P35249 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.13■□□□□ 0.97
RFC4P35249 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC21.13■□□□□ 0.97
RFC4P35249 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.13■□□□□ 0.97
RFC4P35249 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFC4P35249 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFC4P35249 AC133963.1-201ENST00000504166 1679 ntBASIC21.13■□□□□ 0.97
RFC4P35249 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFC4P35249 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms