Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN6P29350 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN6P29350 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
PTPN6P29350 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN6P29350 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PTPN6P29350 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.15■□□□□ 0.18
PTPN6P29350 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.15■□□□□ 0.18
PTPN6P29350 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.15■□□□□ 0.18
PTPN6P29350 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
PTPN6P29350 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.15■□□□□ 0.18
PTPN6P29350 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.15■□□□□ 0.18
PTPN6P29350 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.15■□□□□ 0.18
PTPN6P29350 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.15■□□□□ 0.18
PTPN6P29350 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.15■□□□□ 0.18
PTPN6P29350 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.15■□□□□ 0.18
PTPN6P29350 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.15■□□□□ 0.18
PTPN6P29350 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.15■□□□□ 0.18
PTPN6P29350 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN6P29350 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PTPN6P29350 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN6P29350 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN6P29350 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PTPN6P29350 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN6P29350 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PTPN6P29350 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN6P29350 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.15■□□□□ 0.18
PTPN6P29350 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PTPN6P29350 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PTPN6P29350 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
PTPN6P29350 AL662844.4-201ENST00000606367 2838 ntBASIC16.14■□□□□ 0.17
PTPN6P29350 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PTPN6P29350 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.14■□□□□ 0.17
PTPN6P29350 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.14■□□□□ 0.17
PTPN6P29350 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PTPN6P29350 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN6P29350 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
PTPN6P29350 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PTPN6P29350 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PTPN6P29350 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
PTPN6P29350 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN6P29350 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.14■□□□□ 0.17
PTPN6P29350 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN6P29350 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN6P29350 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.14■□□□□ 0.17
PTPN6P29350 AC132008.2-207ENST00000454517 770 ntBASIC16.14■□□□□ 0.17
PTPN6P29350 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.14■□□□□ 0.17
PTPN6P29350 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN6P29350 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.14■□□□□ 0.17
PTPN6P29350 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.14■□□□□ 0.17
PTPN6P29350 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN6P29350 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN6P29350 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN6P29350 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN6P29350 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN6P29350 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.14■□□□□ 0.17
PTPN6P29350 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
PTPN6P29350 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN6P29350 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN6P29350 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN6P29350 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN6P29350 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN6P29350 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.13■□□□□ 0.17
PTPN6P29350 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
PTPN6P29350 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PTPN6P29350 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.13■□□□□ 0.17
PTPN6P29350 ACTG1P4-201ENST00000425123 1122 ntBASIC16.13■□□□□ 0.17
PTPN6P29350 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.13■□□□□ 0.17
PTPN6P29350 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.13■□□□□ 0.17
PTPN6P29350 SAPCD2P3-201ENST00000455031 850 ntBASIC16.13■□□□□ 0.17
PTPN6P29350 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.13■□□□□ 0.17
PTPN6P29350 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PTPN6P29350 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.13■□□□□ 0.17
PTPN6P29350 AP000867.4-201ENST00000641616 219 ntBASIC16.13■□□□□ 0.17
PTPN6P29350 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.13■□□□□ 0.17
PTPN6P29350 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 AL391256.1-201ENST00000443260 1855 ntBASIC16.13■□□□□ 0.17
PTPN6P29350 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.13■□□□□ 0.17
PTPN6P29350 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.13■□□□□ 0.17
PTPN6P29350 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.13■□□□□ 0.17
PTPN6P29350 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.13■□□□□ 0.17
PTPN6P29350 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
PTPN6P29350 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PTPN6P29350 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.13■□□□□ 0.17
PTPN6P29350 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 TUBB8P12-201ENST00000308911 1335 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms