Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
GDF1P27539 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.4■□□□□ 0.06
GDF1P27539 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.4■□□□□ 0.06
GDF1P27539 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.4■□□□□ 0.06
GDF1P27539 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.4■□□□□ 0.06
GDF1P27539 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
GDF1P27539 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.39■□□□□ 0.05
GDF1P27539 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 RPS8P6-201ENST00000426177 609 ntBASIC15.39■□□□□ 0.05
GDF1P27539 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.39■□□□□ 0.05
GDF1P27539 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.39■□□□□ 0.05
GDF1P27539 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.39■□□□□ 0.05
GDF1P27539 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.39■□□□□ 0.05
GDF1P27539 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.39■□□□□ 0.05
GDF1P27539 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.39■□□□□ 0.05
GDF1P27539 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
GDF1P27539 AC005412.3-201ENST00000580309 715 ntBASIC15.39■□□□□ 0.05
GDF1P27539 AC055717.3-201ENST00000622967 595 ntBASIC15.39■□□□□ 0.05
GDF1P27539 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
GDF1P27539 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.39■□□□□ 0.05
GDF1P27539 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
GDF1P27539 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GDF1P27539 PP12613-201ENST00000424958 2230 ntBASIC15.39■□□□□ 0.05
GDF1P27539 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.38■□□□□ 0.05
GDF1P27539 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.38■□□□□ 0.05
GDF1P27539 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.38■□□□□ 0.05
GDF1P27539 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.38■□□□□ 0.05
GDF1P27539 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 HTR5BP-201ENST00000430851 1154 ntBASIC15.38■□□□□ 0.05
GDF1P27539 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 FAM58CP-201ENST00000435741 640 ntBASIC15.38■□□□□ 0.05
GDF1P27539 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.38■□□□□ 0.05
GDF1P27539 REXO1L3P-201ENST00000622202 1288 ntBASIC15.38■□□□□ 0.05
GDF1P27539 AC079781.4-201ENST00000641908 219 ntBASIC15.38■□□□□ 0.05
GDF1P27539 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.38■□□□□ 0.05
GDF1P27539 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.38■□□□□ 0.05
GDF1P27539 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 AL023806.1-201ENST00000603994 1649 ntBASIC15.38■□□□□ 0.05
GDF1P27539 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
GDF1P27539 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.38■□□□□ 0.05
GDF1P27539 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 FRMD8P1-201ENST00000440433 1524 ntBASIC15.38■□□□□ 0.05
GDF1P27539 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDF1P27539 AL021920.2-201ENST00000624828 1351 ntBASIC15.37■□□□□ 0.05
GDF1P27539 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.37■□□□□ 0.05
GDF1P27539 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 AC141586.5-201ENST00000624546 2050 ntBASIC15.37■□□□□ 0.05
GDF1P27539 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
GDF1P27539 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.37■□□□□ 0.05
GDF1P27539 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.37■□□□□ 0.05
GDF1P27539 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.37■□□□□ 0.05
GDF1P27539 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.37■□□□□ 0.05
GDF1P27539 AC211486.1-202ENST00000416371 468 ntBASIC15.37■□□□□ 0.05
GDF1P27539 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.37■□□□□ 0.05
GDF1P27539 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.37■□□□□ 0.05
GDF1P27539 AC004967.1-201ENST00000453589 447 ntBASIC15.37■□□□□ 0.05
GDF1P27539 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
GDF1P27539 AC211476.1-201ENST00000503899 468 ntBASIC15.37■□□□□ 0.05
GDF1P27539 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms