Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.3□□□□□ -0.12
CXCL3P19876 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCL3P19876 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCL3P19876 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.3□□□□□ -0.12
CXCL3P19876 AL023875.1-201ENST00000640777 796 ntBASIC14.3□□□□□ -0.12
CXCL3P19876 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CXCL3P19876 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL3P19876 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL3P19876 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCL3P19876 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.3□□□□□ -0.12
CXCL3P19876 AC106881.1-201ENST00000605849 3329 ntBASIC14.3□□□□□ -0.12
CXCL3P19876 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL3P19876 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL3P19876 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL3P19876 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL3P19876 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.3□□□□□ -0.12
CXCL3P19876 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL3P19876 AC139749.1-202ENST00000617529 3139 ntBASIC14.3□□□□□ -0.12
CXCL3P19876 EGFEM1P-202ENST00000431685 1563 ntBASIC14.3□□□□□ -0.12
CXCL3P19876 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCL3P19876 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CXCL3P19876 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CXCL3P19876 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.29□□□□□ -0.12
CXCL3P19876 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CXCL3P19876 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.29□□□□□ -0.12
CXCL3P19876 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CXCL3P19876 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL3P19876 ID1-201ENST00000376105 1233 ntBASIC14.29□□□□□ -0.12
CXCL3P19876 KRASP1-201ENST00000407852 552 ntBASIC14.29□□□□□ -0.12
CXCL3P19876 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.29□□□□□ -0.12
CXCL3P19876 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL3P19876 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL3P19876 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.29□□□□□ -0.12
CXCL3P19876 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL3P19876 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 AC008687.5-201ENST00000593746 558 ntBASIC14.29□□□□□ -0.12
CXCL3P19876 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 CICP24-201ENST00000605464 2705 ntBASIC14.29□□□□□ -0.12
CXCL3P19876 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CXCL3P19876 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CXCL3P19876 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL3P19876 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL3P19876 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL3P19876 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CXCL3P19876 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CXCL3P19876 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL3P19876 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CXCL3P19876 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CXCL3P19876 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CXCL3P19876 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CXCL3P19876 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CXCL3P19876 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCL3P19876 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.28□□□□□ -0.12
CXCL3P19876 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.28□□□□□ -0.12
CXCL3P19876 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCL3P19876 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCL3P19876 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCL3P19876 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCL3P19876 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.28□□□□□ -0.12
CXCL3P19876 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.28□□□□□ -0.12
CXCL3P19876 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CXCL3P19876 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCL3P19876 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CXCL3P19876 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms