Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.61■□□□□ 0.73
CAPN2P17655 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.61■□□□□ 0.73
CAPN2P17655 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.61■□□□□ 0.73
CAPN2P17655 AC002056.1-201ENST00000395613 760 ntBASIC19.61■□□□□ 0.73
CAPN2P17655 KLF4P1-201ENST00000412782 1185 ntBASIC19.61■□□□□ 0.73
CAPN2P17655 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.61■□□□□ 0.73
CAPN2P17655 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.61■□□□□ 0.73
CAPN2P17655 CXCL1P1-201ENST00000502804 216 ntBASIC19.61■□□□□ 0.73
CAPN2P17655 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.61■□□□□ 0.73
CAPN2P17655 OR7E47P-204ENST00000575924 449 ntBASIC19.61■□□□□ 0.73
CAPN2P17655 AL359881.2-201ENST00000602973 570 ntBASIC19.61■□□□□ 0.73
CAPN2P17655 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.61■□□□□ 0.73
CAPN2P17655 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.61■□□□□ 0.73
CAPN2P17655 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
CAPN2P17655 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CAPN2P17655 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CAPN2P17655 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CAPN2P17655 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN2P17655 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.6■□□□□ 0.73
CAPN2P17655 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CAPN2P17655 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.6■□□□□ 0.73
CAPN2P17655 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 AC002472.2-201ENST00000442739 958 ntBASIC19.6■□□□□ 0.73
CAPN2P17655 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.6■□□□□ 0.73
CAPN2P17655 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.6■□□□□ 0.73
CAPN2P17655 AL390955.2-201ENST00000603032 514 ntBASIC19.6■□□□□ 0.73
CAPN2P17655 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CAPN2P17655 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CAPN2P17655 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CAPN2P17655 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.6■□□□□ 0.73
CAPN2P17655 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CAPN2P17655 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN2P17655 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CAPN2P17655 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.59■□□□□ 0.73
CAPN2P17655 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.59■□□□□ 0.73
CAPN2P17655 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.59■□□□□ 0.73
CAPN2P17655 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CAPN2P17655 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CAPN2P17655 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.59■□□□□ 0.73
CAPN2P17655 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.59■□□□□ 0.73
CAPN2P17655 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CAPN2P17655 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 AL627223.1-201ENST00000416693 442 ntBASIC19.59■□□□□ 0.73
CAPN2P17655 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CAPN2P17655 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.59■□□□□ 0.73
CAPN2P17655 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.59■□□□□ 0.73
CAPN2P17655 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.59■□□□□ 0.73
CAPN2P17655 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.59■□□□□ 0.73
CAPN2P17655 AC051619.7-201ENST00000568314 623 ntBASIC19.59■□□□□ 0.73
CAPN2P17655 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CAPN2P17655 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CAPN2P17655 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.59■□□□□ 0.73
CAPN2P17655 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN2P17655 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms