Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.51■□□□□ 0.39
HMGA1P17096 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.51■□□□□ 0.39
HMGA1P17096 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGA1P17096 AC008267.7-201ENST00000624570 1194 ntBASIC17.51■□□□□ 0.39
HMGA1P17096 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGA1P17096 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGA1P17096 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.51■□□□□ 0.39
HMGA1P17096 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGA1P17096 UXT-AS1-201ENST00000590504 1525 ntBASIC17.51■□□□□ 0.39
HMGA1P17096 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HMGA1P17096 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGA1P17096 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
HMGA1P17096 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGA1P17096 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HMGA1P17096 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA1P17096 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA1P17096 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA1P17096 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA1P17096 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA1P17096 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGA1P17096 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGA1P17096 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA1P17096 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGA1P17096 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGA1P17096 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGA1P17096 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGA1P17096 SLC25A39P2-201ENST00000537614 270 ntBASIC17.5■□□□□ 0.39
HMGA1P17096 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGA1P17096 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA1P17096 AP000842.3-202ENST00000569238 1080 ntBASIC17.5■□□□□ 0.39
HMGA1P17096 AC027307.2-201ENST00000591252 911 ntBASIC17.5■□□□□ 0.39
HMGA1P17096 AC021097.1-201ENST00000607902 574 ntBASIC17.5■□□□□ 0.39
HMGA1P17096 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HMGA1P17096 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA1P17096 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA1P17096 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA1P17096 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA1P17096 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA1P17096 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA1P17096 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGA1P17096 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
HMGA1P17096 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA1P17096 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HMGA1P17096 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGA1P17096 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HMGA1P17096 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.49■□□□□ 0.39
HMGA1P17096 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGA1P17096 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
HMGA1P17096 SPDYE14P-201ENST00000442619 822 ntBASIC17.49■□□□□ 0.39
HMGA1P17096 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
HMGA1P17096 FAM86GP-201ENST00000448322 971 ntBASIC17.49■□□□□ 0.39
HMGA1P17096 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGA1P17096 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGA1P17096 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.49■□□□□ 0.39
HMGA1P17096 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 AC069262.1-201ENST00000539058 672 ntBASIC17.49■□□□□ 0.39
HMGA1P17096 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HMGA1P17096 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HMGA1P17096 AC026150.2-201ENST00000564693 1156 ntBASIC17.49■□□□□ 0.39
HMGA1P17096 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGA1P17096 AC005498.2-205ENST00000593218 784 ntBASIC17.49■□□□□ 0.39
HMGA1P17096 AC013467.2-201ENST00000605472 835 ntBASIC17.49■□□□□ 0.39
HMGA1P17096 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.49■□□□□ 0.39
HMGA1P17096 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
HMGA1P17096 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.49■□□□□ 0.39
HMGA1P17096 AC139713.2-201ENST00000641328 2723 ntBASIC17.49■□□□□ 0.39
HMGA1P17096 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HMGA1P17096 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HMGA1P17096 AC006277.1-201ENST00000624348 1610 ntBASIC17.49■□□□□ 0.39
HMGA1P17096 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
HMGA1P17096 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.49■□□□□ 0.39
HMGA1P17096 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HMGA1P17096 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA1P17096 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HMGA1P17096 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.48■□□□□ 0.39
HMGA1P17096 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMGA1P17096 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGA1P17096 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMGA1P17096 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMGA1P17096 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGA1P17096 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGA1P17096 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGA1P17096 AL671710.1-201ENST00000610245 2349 ntBASIC17.48■□□□□ 0.39
HMGA1P17096 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.48■□□□□ 0.39
HMGA1P17096 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms