Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL3L1P16619 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CCL3L1P16619 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL3L1P16619 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CCL3L1P16619 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
CCL3L1P16619 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL3L1P16619 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CCL3L1P16619 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CCL3L1P16619 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CCL3L1P16619 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL3L1P16619 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.03□□□□□ -0.16
CCL3L1P16619 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL3L1P16619 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL3L1P16619 MIR4751-201ENST00000578027 74 ntBASIC14.03□□□□□ -0.16
CCL3L1P16619 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.03□□□□□ -0.16
CCL3L1P16619 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL3L1P16619 GGTLC5P-201ENST00000617623 998 ntBASIC14.03□□□□□ -0.16
CCL3L1P16619 AC004790.2-201ENST00000623588 572 ntBASIC14.03□□□□□ -0.16
CCL3L1P16619 AF228730.7-201ENST00000641842 219 ntBASIC14.03□□□□□ -0.16
CCL3L1P16619 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL3L1P16619 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCL3L1P16619 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL3L1P16619 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL3L1P16619 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL3L1P16619 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL3L1P16619 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL3L1P16619 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CCL3L1P16619 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL3L1P16619 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.02□□□□□ -0.16
CCL3L1P16619 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL3L1P16619 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL3L1P16619 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.02□□□□□ -0.16
CCL3L1P16619 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCL3L1P16619 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCL3L1P16619 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.16
CCL3L1P16619 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL3L1P16619 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL3L1P16619 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.02□□□□□ -0.17
CCL3L1P16619 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL3L1P16619 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL3L1P16619 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.02□□□□□ -0.17
CCL3L1P16619 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.02□□□□□ -0.17
CCL3L1P16619 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.02□□□□□ -0.17
CCL3L1P16619 SLC25A6P2-201ENST00000497974 877 ntBASIC14.02□□□□□ -0.17
CCL3L1P16619 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CCL3L1P16619 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.02□□□□□ -0.17
CCL3L1P16619 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.02□□□□□ -0.17
CCL3L1P16619 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.02□□□□□ -0.17
CCL3L1P16619 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.02□□□□□ -0.17
CCL3L1P16619 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.02□□□□□ -0.17
CCL3L1P16619 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL3L1P16619 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.02□□□□□ -0.17
CCL3L1P16619 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL3L1P16619 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.02□□□□□ -0.17
CCL3L1P16619 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL3L1P16619 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL3L1P16619 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL3L1P16619 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.02□□□□□ -0.17
CCL3L1P16619 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL3L1P16619 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CCL3L1P16619 AD000864.1-201ENST00000624076 2295 ntBASIC14.02□□□□□ -0.17
CCL3L1P16619 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL3L1P16619 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
CCL3L1P16619 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL3L1P16619 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL3L1P16619 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL3L1P16619 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL3L1P16619 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL3L1P16619 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
CCL3L1P16619 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL3L1P16619 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CCL3L1P16619 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL3L1P16619 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL3L1P16619 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL3L1P16619 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CCL3L1P16619 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL3L1P16619 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms