Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SP9P0CG40 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SP9P0CG40 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.53■□□□□ 0.24
SP9P0CG40 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SP9P0CG40 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SP9P0CG40 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SP9P0CG40 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.53■□□□□ 0.24
SP9P0CG40 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SP9P0CG40 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SP9P0CG40 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SP9P0CG40 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SP9P0CG40 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SP9P0CG40 MIR1908-201ENST00000410394 80 ntBASIC16.53■□□□□ 0.24
SP9P0CG40 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.53■□□□□ 0.24
SP9P0CG40 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.53■□□□□ 0.24
SP9P0CG40 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.53■□□□□ 0.24
SP9P0CG40 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SP9P0CG40 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SP9P0CG40 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SP9P0CG40 AC098859.1-201ENST00000502915 1238 ntBASIC16.53■□□□□ 0.24
SP9P0CG40 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.53■□□□□ 0.24
SP9P0CG40 AC023310.3-201ENST00000557027 670 ntBASIC16.53■□□□□ 0.24
SP9P0CG40 AC100756.1-201ENST00000562736 682 ntBASIC16.53■□□□□ 0.24
SP9P0CG40 AC138749.3-201ENST00000567691 622 ntBASIC16.53■□□□□ 0.24
SP9P0CG40 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.53■□□□□ 0.24
SP9P0CG40 AC116165.1-201ENST00000611806 668 ntBASIC16.53■□□□□ 0.24
SP9P0CG40 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SP9P0CG40 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SP9P0CG40 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SP9P0CG40 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.53■□□□□ 0.24
SP9P0CG40 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.53■□□□□ 0.24
SP9P0CG40 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.53■□□□□ 0.24
SP9P0CG40 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.53■□□□□ 0.24
SP9P0CG40 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SP9P0CG40 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.53■□□□□ 0.24
SP9P0CG40 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SP9P0CG40 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.53■□□□□ 0.24
SP9P0CG40 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SP9P0CG40 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SP9P0CG40 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SP9P0CG40 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SP9P0CG40 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SP9P0CG40 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SP9P0CG40 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.52■□□□□ 0.24
SP9P0CG40 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SP9P0CG40 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SP9P0CG40 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SP9P0CG40 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SP9P0CG40 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.52■□□□□ 0.24
SP9P0CG40 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.52■□□□□ 0.24
SP9P0CG40 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.52■□□□□ 0.24
SP9P0CG40 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SP9P0CG40 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SP9P0CG40 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SP9P0CG40 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.52■□□□□ 0.24
SP9P0CG40 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.52■□□□□ 0.23
SP9P0CG40 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SP9P0CG40 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SP9P0CG40 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SP9P0CG40 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.52■□□□□ 0.23
SP9P0CG40 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SP9P0CG40 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SP9P0CG40 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SP9P0CG40 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SP9P0CG40 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SP9P0CG40 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SP9P0CG40 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.51■□□□□ 0.23
SP9P0CG40 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.51■□□□□ 0.23
SP9P0CG40 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SP9P0CG40 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.51■□□□□ 0.23
SP9P0CG40 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SP9P0CG40 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SP9P0CG40 AC098850.1-201ENST00000419919 790 ntBASIC16.51■□□□□ 0.23
SP9P0CG40 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.51■□□□□ 0.23
SP9P0CG40 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.51■□□□□ 0.23
SP9P0CG40 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SP9P0CG40 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SP9P0CG40 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SP9P0CG40 SERBP1P3-201ENST00000459980 809 ntBASIC16.51■□□□□ 0.23
SP9P0CG40 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SP9P0CG40 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
SP9P0CG40 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.51■□□□□ 0.23
SP9P0CG40 AC015936.2-201ENST00000593177 259 ntBASIC16.51■□□□□ 0.23
SP9P0CG40 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.51■□□□□ 0.23
SP9P0CG40 AC093726.1-201ENST00000608064 963 ntBASIC16.51■□□□□ 0.23
SP9P0CG40 WFDC1-204ENST00000613603 549 ntBASIC16.51■□□□□ 0.23
SP9P0CG40 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.51■□□□□ 0.23
SP9P0CG40 AC004461.2-201ENST00000629517 803 ntBASIC16.51■□□□□ 0.23
SP9P0CG40 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.51■□□□□ 0.23
SP9P0CG40 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.51■□□□□ 0.23
SP9P0CG40 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SP9P0CG40 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SP9P0CG40 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SP9P0CG40 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.51■□□□□ 0.23
SP9P0CG40 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SP9P0CG40 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SP9P0CG40 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SP9P0CG40 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SP9P0CG40 AC073439.1-201ENST00000624121 1774 ntBASIC16.51■□□□□ 0.23
SP9P0CG40 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms