Protein–RNA interactions for Protein: P08922

ROS1, Proto-oncogene tyrosine-protein kinase ROS, humanhuman

Predictions only

Length 2,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROS1P08922 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.63□□□□□ -0.07
ROS1P08922 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.63□□□□□ -0.07
ROS1P08922 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
ROS1P08922 HMGA1P7-201ENST00000406908 502 ntBASIC14.63□□□□□ -0.07
ROS1P08922 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.63□□□□□ -0.07
ROS1P08922 AC093214.1-201ENST00000511688 1107 ntBASIC14.63□□□□□ -0.07
ROS1P08922 AC107918.2-201ENST00000530817 355 ntBASIC14.63□□□□□ -0.07
ROS1P08922 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ROS1P08922 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
ROS1P08922 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 AKAP8P1-201ENST00000434743 1349 ntBASIC14.63□□□□□ -0.07
ROS1P08922 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 AC133963.1-201ENST00000504166 1679 ntBASIC14.63□□□□□ -0.07
ROS1P08922 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.63□□□□□ -0.07
ROS1P08922 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.63□□□□□ -0.07
ROS1P08922 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.63□□□□□ -0.07
ROS1P08922 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ROS1P08922 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.63□□□□□ -0.07
ROS1P08922 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.63□□□□□ -0.07
ROS1P08922 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ROS1P08922 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.62□□□□□ -0.07
ROS1P08922 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.62□□□□□ -0.07
ROS1P08922 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.62□□□□□ -0.07
ROS1P08922 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.62□□□□□ -0.07
ROS1P08922 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ROS1P08922 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.62□□□□□ -0.07
ROS1P08922 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.62□□□□□ -0.07
ROS1P08922 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.62□□□□□ -0.07
ROS1P08922 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.62□□□□□ -0.07
ROS1P08922 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ROS1P08922 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
ROS1P08922 SPDYE11-202ENST00000450699 704 ntBASIC14.62□□□□□ -0.07
ROS1P08922 SLC25A6P2-201ENST00000497974 877 ntBASIC14.62□□□□□ -0.07
ROS1P08922 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.62□□□□□ -0.07
ROS1P08922 SPDYE9P-201ENST00000570642 692 ntBASIC14.62□□□□□ -0.07
ROS1P08922 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.62□□□□□ -0.07
ROS1P08922 AC004835.2-201ENST00000603762 682 ntBASIC14.62□□□□□ -0.07
ROS1P08922 SPDYE10P-202ENST00000612005 668 ntBASIC14.62□□□□□ -0.07
ROS1P08922 SPDYE8P-202ENST00000612377 668 ntBASIC14.62□□□□□ -0.07
ROS1P08922 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ROS1P08922 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.62□□□□□ -0.07
ROS1P08922 AP001059.3-201ENST00000619053 235 ntBASIC14.62□□□□□ -0.07
ROS1P08922 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.62□□□□□ -0.07
ROS1P08922 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.62□□□□□ -0.07
ROS1P08922 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.62□□□□□ -0.07
ROS1P08922 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ROS1P08922 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ROS1P08922 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ROS1P08922 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.62□□□□□ -0.07
ROS1P08922 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
ROS1P08922 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ROS1P08922 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
ROS1P08922 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.61□□□□□ -0.07
ROS1P08922 TFAMP1-201ENST00000412727 736 ntBASIC14.61□□□□□ -0.07
ROS1P08922 AL592309.1-201ENST00000443127 649 ntBASIC14.61□□□□□ -0.07
ROS1P08922 AC074386.1-202ENST00000463561 864 ntBASIC14.61□□□□□ -0.07
ROS1P08922 HLA-J-203ENST00000494367 1087 ntBASIC14.61□□□□□ -0.07
ROS1P08922 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.61□□□□□ -0.07
ROS1P08922 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.61□□□□□ -0.07
ROS1P08922 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.61□□□□□ -0.07
ROS1P08922 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.61□□□□□ -0.07
ROS1P08922 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ROS1P08922 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ROS1P08922 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ROS1P08922 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ROS1P08922 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ROS1P08922 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ROS1P08922 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms