Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CTSBP07858 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
CTSBP07858 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSBP07858 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CTSBP07858 AL671710.1-201ENST00000610245 2349 ntBASIC16.03■□□□□ 0.16
CTSBP07858 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.03■□□□□ 0.16
CTSBP07858 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CTSBP07858 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTSBP07858 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
CTSBP07858 AC131009.4-201ENST00000624048 1740 ntBASIC16.03■□□□□ 0.16
CTSBP07858 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.03■□□□□ 0.16
CTSBP07858 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTSBP07858 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.03■□□□□ 0.16
CTSBP07858 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CTSBP07858 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CTSBP07858 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTSBP07858 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.03■□□□□ 0.16
CTSBP07858 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTSBP07858 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTSBP07858 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.03■□□□□ 0.16
CTSBP07858 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CTSBP07858 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
CTSBP07858 ADH5P3-201ENST00000433842 1137 ntBASIC16.03■□□□□ 0.16
CTSBP07858 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CTSBP07858 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.03■□□□□ 0.16
CTSBP07858 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.03■□□□□ 0.16
CTSBP07858 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CTSBP07858 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTSBP07858 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
CTSBP07858 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.03■□□□□ 0.16
CTSBP07858 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.03■□□□□ 0.16
CTSBP07858 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.03■□□□□ 0.16
CTSBP07858 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTSBP07858 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.03■□□□□ 0.16
CTSBP07858 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CTSBP07858 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CTSBP07858 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.03■□□□□ 0.16
CTSBP07858 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CTSBP07858 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CTSBP07858 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTSBP07858 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTSBP07858 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTSBP07858 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTSBP07858 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CTSBP07858 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.03■□□□□ 0.16
CTSBP07858 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTSBP07858 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CTSBP07858 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTSBP07858 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.02■□□□□ 0.16
CTSBP07858 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CTSBP07858 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.02■□□□□ 0.16
CTSBP07858 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CTSBP07858 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTSBP07858 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTSBP07858 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTSBP07858 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CTSBP07858 AL121761.2-201ENST00000598007 1648 ntBASIC16.02■□□□□ 0.16
CTSBP07858 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CTSBP07858 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTSBP07858 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTSBP07858 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
CTSBP07858 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.02■□□□□ 0.16
CTSBP07858 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.02■□□□□ 0.16
CTSBP07858 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.02■□□□□ 0.16
CTSBP07858 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.02■□□□□ 0.16
CTSBP07858 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.02■□□□□ 0.16
CTSBP07858 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.02■□□□□ 0.16
CTSBP07858 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.02■□□□□ 0.16
CTSBP07858 MIR4492-201ENST00000581627 80 ntBASIC16.02■□□□□ 0.16
CTSBP07858 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CTSBP07858 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.02■□□□□ 0.16
CTSBP07858 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.02■□□□□ 0.16
CTSBP07858 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CTSBP07858 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CTSBP07858 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.02■□□□□ 0.16
CTSBP07858 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
CTSBP07858 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTSBP07858 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.02■□□□□ 0.16
CTSBP07858 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTSBP07858 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.02■□□□□ 0.15
CTSBP07858 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.02■□□□□ 0.15
CTSBP07858 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CTSBP07858 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CTSBP07858 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CTSBP07858 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CTSBP07858 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CTSBP07858 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CTSBP07858 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CTSBP07858 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CTSBP07858 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CTSBP07858 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CTSBP07858 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CTSBP07858 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CTSBP07858 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CTSBP07858 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CTSBP07858 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CTSBP07858 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CTSBP07858 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CTSBP07858 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CTSBP07858 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms