Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.32■□□□□ 0.2
GFRA3O60609 RPL7P3-201ENST00000441388 714 ntBASIC16.32■□□□□ 0.2
GFRA3O60609 RPL13AP20-201ENST00000459725 609 ntBASIC16.32■□□□□ 0.2
GFRA3O60609 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
GFRA3O60609 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.32■□□□□ 0.2
GFRA3O60609 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.32■□□□□ 0.2
GFRA3O60609 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GFRA3O60609 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GFRA3O60609 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.32■□□□□ 0.2
GFRA3O60609 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.32■□□□□ 0.2
GFRA3O60609 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.32■□□□□ 0.2
GFRA3O60609 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.32■□□□□ 0.2
GFRA3O60609 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GFRA3O60609 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
GFRA3O60609 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GFRA3O60609 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
GFRA3O60609 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GFRA3O60609 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.31■□□□□ 0.2
GFRA3O60609 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
GFRA3O60609 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.31■□□□□ 0.2
GFRA3O60609 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.31■□□□□ 0.2
GFRA3O60609 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.31■□□□□ 0.2
GFRA3O60609 CLK3P2-201ENST00000427566 1453 ntBASIC16.31■□□□□ 0.2
GFRA3O60609 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.31■□□□□ 0.2
GFRA3O60609 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 FAM220BP-201ENST00000377689 816 ntBASIC16.31■□□□□ 0.2
GFRA3O60609 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.31■□□□□ 0.2
GFRA3O60609 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
GFRA3O60609 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.31■□□□□ 0.2
GFRA3O60609 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.31■□□□□ 0.2
GFRA3O60609 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.31■□□□□ 0.2
GFRA3O60609 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 AC104596.2-201ENST00000512793 793 ntBASIC16.31■□□□□ 0.2
GFRA3O60609 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.31■□□□□ 0.2
GFRA3O60609 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.31■□□□□ 0.2
GFRA3O60609 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC16.31■□□□□ 0.2
GFRA3O60609 RRP7BP-205ENST00000566851 833 ntBASIC16.31■□□□□ 0.2
GFRA3O60609 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.31■□□□□ 0.2
GFRA3O60609 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
GFRA3O60609 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
GFRA3O60609 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA3O60609 CDC14C-201ENST00000428251 1719 ntBASIC16.31■□□□□ 0.2
GFRA3O60609 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFRA3O60609 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFRA3O60609 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFRA3O60609 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GFRA3O60609 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
GFRA3O60609 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GFRA3O60609 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.3■□□□□ 0.2
GFRA3O60609 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.3■□□□□ 0.2
GFRA3O60609 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFRA3O60609 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFRA3O60609 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
GFRA3O60609 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFRA3O60609 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GFRA3O60609 AC104457.1-201ENST00000401024 814 ntBASIC16.3■□□□□ 0.2
GFRA3O60609 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.3■□□□□ 0.2
GFRA3O60609 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GFRA3O60609 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.3■□□□□ 0.2
GFRA3O60609 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.3■□□□□ 0.2
GFRA3O60609 AL589987.1-201ENST00000453380 819 ntBASIC16.3■□□□□ 0.2
GFRA3O60609 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.3■□□□□ 0.2
GFRA3O60609 SDHAP3-202ENST00000515467 728 ntBASIC16.3■□□□□ 0.2
GFRA3O60609 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.3■□□□□ 0.2
GFRA3O60609 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.3■□□□□ 0.2
GFRA3O60609 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.3■□□□□ 0.2
GFRA3O60609 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.3■□□□□ 0.2
GFRA3O60609 RN7SL560P-201ENST00000577943 264 ntBASIC16.3■□□□□ 0.2
GFRA3O60609 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.3■□□□□ 0.2
GFRA3O60609 AC009542.2-202ENST00000619004 1067 ntBASIC16.3■□□□□ 0.2
GFRA3O60609 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GFRA3O60609 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GFRA3O60609 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.3■□□□□ 0.2
GFRA3O60609 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFRA3O60609 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GFRA3O60609 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFRA3O60609 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFRA3O60609 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFRA3O60609 FOXO1B-201ENST00000504678 1527 ntBASIC16.29■□□□□ 0.2
GFRA3O60609 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA3O60609 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.29■□□□□ 0.2
GFRA3O60609 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms