Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
KCNQ3O43525 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
KCNQ3O43525 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.66■■□□□ 1.06
KCNQ3O43525 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
KCNQ3O43525 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
KCNQ3O43525 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ3O43525 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.66■■□□□ 1.06
KCNQ3O43525 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC21.65■■□□□ 1.06
KCNQ3O43525 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.65■■□□□ 1.06
KCNQ3O43525 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.65■■□□□ 1.06
KCNQ3O43525 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ3O43525 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ3O43525 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ3O43525 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
KCNQ3O43525 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ3O43525 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ3O43525 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.65■■□□□ 1.06
KCNQ3O43525 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ3O43525 PTMS-202ENST00000389462 773 ntTSL 2 BASIC21.65■■□□□ 1.06
KCNQ3O43525 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.65■■□□□ 1.06
KCNQ3O43525 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.65■■□□□ 1.06
KCNQ3O43525 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ3O43525 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.65■■□□□ 1.06
KCNQ3O43525 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
KCNQ3O43525 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ3O43525 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.65■■□□□ 1.06
KCNQ3O43525 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
KCNQ3O43525 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KCNQ3O43525 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KCNQ3O43525 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
KCNQ3O43525 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ3O43525 TUBB3P1-201ENST00000405796 1332 ntBASIC21.64■■□□□ 1.05
KCNQ3O43525 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ3O43525 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
KCNQ3O43525 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ3O43525 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ3O43525 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.64■■□□□ 1.05
KCNQ3O43525 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.64■■□□□ 1.05
KCNQ3O43525 PMS2P4-201ENST00000412466 1052 ntBASIC21.64■■□□□ 1.05
KCNQ3O43525 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.64■■□□□ 1.05
KCNQ3O43525 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.64■■□□□ 1.05
KCNQ3O43525 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.64■■□□□ 1.05
KCNQ3O43525 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ3O43525 KRT8P23-201ENST00000560090 1207 ntBASIC21.64■■□□□ 1.05
KCNQ3O43525 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.64■■□□□ 1.05
KCNQ3O43525 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.64■■□□□ 1.05
KCNQ3O43525 AC011467.4-201ENST00000594891 528 ntBASIC21.64■■□□□ 1.05
KCNQ3O43525 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.64■■□□□ 1.05
KCNQ3O43525 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ3O43525 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ3O43525 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ3O43525 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ3O43525 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ3O43525 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
KCNQ3O43525 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.64■■□□□ 1.05
KCNQ3O43525 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ3O43525 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ3O43525 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ3O43525 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ3O43525 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.64■■□□□ 1.05
KCNQ3O43525 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ3O43525 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ3O43525 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ3O43525 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ3O43525 AL021920.2-201ENST00000624828 1351 ntBASIC21.63■■□□□ 1.05
KCNQ3O43525 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ3O43525 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ3O43525 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
KCNQ3O43525 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ3O43525 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ3O43525 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.63■■□□□ 1.05
KCNQ3O43525 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.63■■□□□ 1.05
KCNQ3O43525 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.63■■□□□ 1.05
KCNQ3O43525 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.63■■□□□ 1.05
KCNQ3O43525 GATD1-206ENST00000526325 756 ntTSL 5 BASIC21.63■■□□□ 1.05
KCNQ3O43525 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.63■■□□□ 1.05
KCNQ3O43525 MIR3909-201ENST00000579518 119 ntBASIC21.63■■□□□ 1.05
KCNQ3O43525 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ3O43525 AC008267.7-201ENST00000624570 1194 ntBASIC21.63■■□□□ 1.05
KCNQ3O43525 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.63■■□□□ 1.05
KCNQ3O43525 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ3O43525 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC21.63■■□□□ 1.05
KCNQ3O43525 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ3O43525 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ3O43525 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.63■■□□□ 1.05
KCNQ3O43525 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ3O43525 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.63■■□□□ 1.05
KCNQ3O43525 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ3O43525 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.62■■□□□ 1.05
KCNQ3O43525 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KCNQ3O43525 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KCNQ3O43525 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KCNQ3O43525 AC106820.2-201ENST00000563775 3264 ntBASIC21.62■■□□□ 1.05
KCNQ3O43525 SNX33P1-201ENST00000592116 1762 ntBASIC21.62■■□□□ 1.05
KCNQ3O43525 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KCNQ3O43525 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KCNQ3O43525 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.62■■□□□ 1.05
KCNQ3O43525 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC21.62■■□□□ 1.05
KCNQ3O43525 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.62■■□□□ 1.05
KCNQ3O43525 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms