Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PFDN6O15212 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PFDN6O15212 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PFDN6O15212 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PFDN6O15212 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.08■□□□□ 0.32
PFDN6O15212 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PFDN6O15212 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PFDN6O15212 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PFDN6O15212 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PFDN6O15212 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.07■□□□□ 0.32
PFDN6O15212 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.07■□□□□ 0.32
PFDN6O15212 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PFDN6O15212 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.07■□□□□ 0.32
PFDN6O15212 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
PFDN6O15212 AL355877.3-201ENST00000622820 899 ntBASIC17.07■□□□□ 0.32
PFDN6O15212 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.07■□□□□ 0.32
PFDN6O15212 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.07■□□□□ 0.32
PFDN6O15212 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PFDN6O15212 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.07■□□□□ 0.32
PFDN6O15212 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN6O15212 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PFDN6O15212 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN6O15212 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
PFDN6O15212 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN6O15212 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.06■□□□□ 0.32
PFDN6O15212 AL021920.2-201ENST00000624828 1351 ntBASIC17.06■□□□□ 0.32
PFDN6O15212 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN6O15212 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.06■□□□□ 0.32
PFDN6O15212 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PFDN6O15212 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PFDN6O15212 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN6O15212 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.06■□□□□ 0.32
PFDN6O15212 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.06■□□□□ 0.32
PFDN6O15212 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN6O15212 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN6O15212 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.06■□□□□ 0.32
PFDN6O15212 AL589182.2-201ENST00000619332 1049 ntBASIC17.06■□□□□ 0.32
PFDN6O15212 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PFDN6O15212 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.06■□□□□ 0.32
PFDN6O15212 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN6O15212 AC092053.1-201ENST00000605787 1936 ntBASIC17.06■□□□□ 0.32
PFDN6O15212 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
PFDN6O15212 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN6O15212 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN6O15212 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN6O15212 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN6O15212 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN6O15212 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN6O15212 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PFDN6O15212 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.05■□□□□ 0.32
PFDN6O15212 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN6O15212 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PFDN6O15212 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN6O15212 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN6O15212 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN6O15212 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms