Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.89■□□□□ 0.45
SOX1O00570 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SOX1O00570 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SOX1O00570 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SOX1O00570 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX1O00570 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.88■□□□□ 0.45
SOX1O00570 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX1O00570 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.88■□□□□ 0.45
SOX1O00570 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX1O00570 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX1O00570 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX1O00570 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.88■□□□□ 0.45
SOX1O00570 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SOX1O00570 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.88■□□□□ 0.45
SOX1O00570 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.88■□□□□ 0.45
SOX1O00570 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.88■□□□□ 0.45
SOX1O00570 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.88■□□□□ 0.45
SOX1O00570 AP001889.1-201ENST00000525414 633 ntBASIC17.88■□□□□ 0.45
SOX1O00570 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.88■□□□□ 0.45
SOX1O00570 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
SOX1O00570 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.88■□□□□ 0.45
SOX1O00570 AL365330.1-201ENST00000607459 531 ntBASIC17.88■□□□□ 0.45
SOX1O00570 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.88■□□□□ 0.45
SOX1O00570 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX1O00570 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.88■□□□□ 0.45
SOX1O00570 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.88■□□□□ 0.45
SOX1O00570 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX1O00570 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX1O00570 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX1O00570 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
SOX1O00570 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX1O00570 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.87■□□□□ 0.45
SOX1O00570 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX1O00570 SLC22A20-204ENST00000530038 1673 ntBASIC17.87■□□□□ 0.45
SOX1O00570 ANO7L1-203ENST00000602586 1720 ntBASIC17.87■□□□□ 0.45
SOX1O00570 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX1O00570 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX1O00570 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX1O00570 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX1O00570 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX1O00570 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX1O00570 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SOX1O00570 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SOX1O00570 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.87■□□□□ 0.45
SOX1O00570 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.87■□□□□ 0.45
SOX1O00570 CALR4P-201ENST00000431943 946 ntBASIC17.87■□□□□ 0.45
SOX1O00570 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.87■□□□□ 0.45
SOX1O00570 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.87■□□□□ 0.45
SOX1O00570 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.87■□□□□ 0.45
SOX1O00570 SLC25A47P1-201ENST00000531577 414 ntBASIC17.87■□□□□ 0.45
SOX1O00570 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.87■□□□□ 0.45
SOX1O00570 AC105129.2-201ENST00000559536 390 ntBASIC17.87■□□□□ 0.45
SOX1O00570 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.87■□□□□ 0.45
SOX1O00570 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SOX1O00570 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX1O00570 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX1O00570 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SOX1O00570 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.87■□□□□ 0.45
SOX1O00570 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SOX1O00570 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX1O00570 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.87■□□□□ 0.45
SOX1O00570 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX1O00570 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX1O00570 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
SOX1O00570 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX1O00570 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.86■□□□□ 0.45
SOX1O00570 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.86■□□□□ 0.45
SOX1O00570 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.86■□□□□ 0.45
SOX1O00570 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.86■□□□□ 0.45
SOX1O00570 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX1O00570 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.86■□□□□ 0.45
SOX1O00570 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX1O00570 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SOX1O00570 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SOX1O00570 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.86■□□□□ 0.45
SOX1O00570 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SOX1O00570 AC006033.1-201ENST00000440505 426 ntBASIC17.86■□□□□ 0.45
SOX1O00570 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX1O00570 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SOX1O00570 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.86■□□□□ 0.45
SOX1O00570 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.86■□□□□ 0.45
SOX1O00570 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.86■□□□□ 0.45
SOX1O00570 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.86■□□□□ 0.45
SOX1O00570 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX1O00570 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.86■□□□□ 0.45
SOX1O00570 AL118558.3-201ENST00000607414 1079 ntBASIC17.86■□□□□ 0.45
SOX1O00570 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.86■□□□□ 0.45
SOX1O00570 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX1O00570 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX1O00570 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.86■□□□□ 0.45
SOX1O00570 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.86■□□□□ 0.45
SOX1O00570 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.86■□□□□ 0.45
SOX1O00570 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX1O00570 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX1O00570 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
SOX1O00570 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SOX1O00570 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.86■□□□□ 0.45
SOX1O00570 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX1O00570 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX1O00570 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms