Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.1■□□□□ 0.65
DDX39AO00148 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.1■□□□□ 0.65
DDX39AO00148 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.1■□□□□ 0.65
DDX39AO00148 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.1■□□□□ 0.65
DDX39AO00148 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX39AO00148 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
DDX39AO00148 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
DDX39AO00148 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
DDX39AO00148 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
DDX39AO00148 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.1■□□□□ 0.65
DDX39AO00148 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.1■□□□□ 0.65
DDX39AO00148 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX39AO00148 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 AC092068.3-201ENST00000587894 2016 ntBASIC19.1■□□□□ 0.65
DDX39AO00148 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
DDX39AO00148 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 AC108860.2-201ENST00000562760 2183 ntBASIC19.09■□□□□ 0.65
DDX39AO00148 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.09■□□□□ 0.65
DDX39AO00148 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 AL645608.8-201ENST00000606034 2086 ntBASIC19.09■□□□□ 0.65
DDX39AO00148 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
DDX39AO00148 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.09■□□□□ 0.65
DDX39AO00148 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 FAM58CP-201ENST00000435741 640 ntBASIC19.09■□□□□ 0.65
DDX39AO00148 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
DDX39AO00148 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.09■□□□□ 0.65
DDX39AO00148 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.09■□□□□ 0.65
DDX39AO00148 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
DDX39AO00148 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.09■□□□□ 0.65
DDX39AO00148 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.09■□□□□ 0.65
DDX39AO00148 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.09■□□□□ 0.65
DDX39AO00148 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
DDX39AO00148 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.09■□□□□ 0.65
DDX39AO00148 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX39AO00148 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.09■□□□□ 0.65
DDX39AO00148 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX39AO00148 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX39AO00148 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX39AO00148 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX39AO00148 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
DDX39AO00148 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX39AO00148 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX39AO00148 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
DDX39AO00148 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX39AO00148 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX39AO00148 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX39AO00148 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
DDX39AO00148 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX39AO00148 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
DDX39AO00148 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX39AO00148 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
DDX39AO00148 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX39AO00148 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX39AO00148 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.08■□□□□ 0.64
DDX39AO00148 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.08■□□□□ 0.64
DDX39AO00148 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
DDX39AO00148 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.08■□□□□ 0.64
DDX39AO00148 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DDX39AO00148 AC005829.1-201ENST00000570002 483 ntBASIC19.08■□□□□ 0.64
DDX39AO00148 MIR4469-201ENST00000583919 79 ntBASIC19.08■□□□□ 0.64
DDX39AO00148 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.08■□□□□ 0.64
DDX39AO00148 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DDX39AO00148 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
DDX39AO00148 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX39AO00148 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX39AO00148 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX39AO00148 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DDX39AO00148 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX39AO00148 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX39AO00148 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX39AO00148 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX39AO00148 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.07■□□□□ 0.64
DDX39AO00148 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
DDX39AO00148 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms