Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 HCG4B-203ENST00000450128 991 ntBASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMX2-CTNND1H3BSU7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 KRT18P28-201ENST00000453838 1332 ntBASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 AC109462.3-201ENST00000573934 613 ntBASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 STK25P1-201ENST00000585406 838 ntBASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMX2-CTNND1H3BSU7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 AP002414.1-201ENST00000391405 1147 ntBASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 HTR5BP-201ENST00000430851 1154 ntBASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 MIR4469-201ENST00000583919 79 ntBASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 AL596442.2-201ENST00000610240 980 ntBASIC16.73■□□□□ 0.27
TMX2-CTNND1H3BSU7 AC004790.2-201ENST00000623588 572 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms