Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 AL139400.1-201ENST00000366220 510 ntBASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 AC005237.2-201ENST00000434368 219 ntBASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 AL161645.1-201ENST00000622716 1255 ntBASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 AL138688.1-201ENST00000624851 1594 ntBASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 TFAMP1-201ENST00000412727 736 ntBASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 AC023141.5-201ENST00000458585 616 ntBASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 KRT8P48-201ENST00000515599 1220 ntBASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 AC025678.2-201ENST00000562061 970 ntBASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.88■□□□□ 0.29
TBC1D3FA6NER0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 ADH5P3-201ENST00000433842 1137 ntBASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 AL592309.1-201ENST00000443127 649 ntBASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 TOP3BP1-201ENST00000420768 1380 ntBASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TBC1D3FA6NER0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms