Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 TOP3BP1-201ENST00000420768 1380 ntBASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 OR6D1P-203ENST00000641209 4860 ntBASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 NOC2LP1-202ENST00000452600 2235 ntBASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.21■□□□□ 0.34
TBC1D3BA6NDS4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.21■□□□□ 0.34
TBC1D3BA6NDS4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 AC069335.1-201ENST00000489972 472 ntBASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3BA6NDS4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 AC092474.2-201ENST00000424288 719 ntBASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 AC091167.2-201ENST00000579581 588 ntBASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 Z92544.3-201ENST00000624747 417 ntBASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 AP001350.2-201ENST00000625104 1094 ntBASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 UXT-AS1-201ENST00000590504 1525 ntBASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3BA6NDS4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms