Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 LINC01311-201ENST00000565162 1445 ntBASIC18.49■□□□□ 0.55
CCDC66A2RUB6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 BX664615.1-201ENST00000443558 458 ntBASIC18.49■□□□□ 0.55
CCDC66A2RUB6 MTCL1P1-201ENST00000446207 792 ntBASIC18.49■□□□□ 0.55
CCDC66A2RUB6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 AC012306.2-201ENST00000609350 630 ntBASIC18.49■□□□□ 0.55
CCDC66A2RUB6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 AL353692.3-201ENST00000407031 1396 ntBASIC18.49■□□□□ 0.55
CCDC66A2RUB6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC66A2RUB6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 MIR662-201ENST00000384847 95 ntBASIC18.48■□□□□ 0.55
CCDC66A2RUB6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 ZNF444P1-201ENST00000559497 298 ntBASIC18.48■□□□□ 0.55
CCDC66A2RUB6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 GPR32P1-201ENST00000601788 811 ntBASIC18.48■□□□□ 0.55
CCDC66A2RUB6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC66A2RUB6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC66A2RUB6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC66A2RUB6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC66A2RUB6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC66A2RUB6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC66A2RUB6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC66A2RUB6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CCDC66A2RUB6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC66A2RUB6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC66A2RUB6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC66A2RUB6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC66A2RUB6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC66A2RUB6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC66A2RUB6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC66A2RUB6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms