Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 COX5BP2-201ENST00000392354 334 ntBASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 AC023157.3-201ENST00000619086 2088 ntBASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 AL009178.2-201ENST00000597278 2719 ntBASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 NUDT16P1-203ENST00000513809 620 ntBASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 AC024243.1-201ENST00000609234 778 ntBASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 AC092865.7-201ENST00000641832 219 ntBASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM27A0A1W2PRY6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.71□□□□□ -0.38
SMIM27A0A1W2PRY6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM27A0A1W2PRY6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.71□□□□□ -0.38
SMIM27A0A1W2PRY6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.71□□□□□ -0.38
SMIM27A0A1W2PRY6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.71□□□□□ -0.38
SMIM27A0A1W2PRY6 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SMIM27A0A1W2PRY6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM27A0A1W2PRY6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM27A0A1W2PRY6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM27A0A1W2PRY6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM27A0A1W2PRY6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.71□□□□□ -0.38
SMIM27A0A1W2PRY6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM27A0A1W2PRY6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM27A0A1W2PRY6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM27A0A1W2PRY6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM27A0A1W2PRY6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms